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Report for CCDS92019.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92019.1 Public Homo sapiens 15 HACD3 24 110 108 CCDS HistoryNCBI Gene:51495Re-query CCDS DB by CCDS ID:92019.1Re-query CCDS DB by GeneID:51495See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92019.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000569894.5 ENSP00000454873.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569894.5Link to Ensembl Protein Viewer:ENSP00000454873.1Re-query CCDS DB by Nucleotide ID:ENST00000569894Re-query CCDS DB by Protein ID:ENSP00000454873
Original member Current member EBI ENST00000566511.5 ENSP00000455587.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566511.5Link to Ensembl Protein Viewer:ENSP00000455587.1Re-query CCDS DB by Nucleotide ID:ENST00000566511Re-query CCDS DB by Protein ID:ENSP00000455587
Original member Current member EBI ENST00000562901.5 ENSP00000455686.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562901.5Link to Ensembl Protein Viewer:ENSP00000455686.1Re-query CCDS DB by Nucleotide ID:ENST00000562901Re-query CCDS DB by Protein ID:ENSP00000455686
Original member Current member EBI ENST00000566074.5 ENSP00000456300.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566074.5Link to Ensembl Protein Viewer:ENSP00000456300.1Re-query CCDS DB by Nucleotide ID:ENST00000566074Re-query CCDS DB by Protein ID:ENSP00000456300
Current member NCBI NM_001411136.1 NP_001398065.1 Accepted alive Link to Nucleotide Sequence:NM_001411136.1Link to Protein Sequence:NP_001398065.1Re-query CCDS DB by Nucleotide ID:NM_001411136Re-query CCDS DB by Protein ID:NP_001398065Link to BLAST:NP_001398065.1

Chromosomal Locations for CCDS 92019.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65556886 65556903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65558680 65558731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65562774 65562884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65564215 65564342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65570091 65570203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65571548 65571654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65572235 65572366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65576303 65576379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGGAGCTCAGAGCTAAGGAAGAAGAGCGCCTAAATAAACTCCGACTGGAAAGCGAAGGCTCTCCTGAAA
CTCTTACAAACTTAAGGAAAGGATACCTGTTTATGTATAATCTTGTGCAATTCTTGGGATTCTCCTGGAT
CTTTGTCAACCTGACTGTGCGATTCTGTATCTTGGGAAAAGAGTCCTTTTATGACACATTCCATACTGTG
GCTGACATGATGTATTTCTGCCAGATGCTGGCAGTTGTGGAAACTATCAATGCAGCAATTGGAGTCACTA
CGTCACCGGTGCTGCCTTCTCTGATCCAGCTTCTTGGAAGAAATTTTATTTTGTTTATCATCTTTGGCAC
CATGGAAGAAATGCAGAACAAAGCTGTGGTTTTCTTTGTGTTTTATTTGTGGAGTGCAATTGAAATTTTC
AGGTACTCTTTCTACATGCTGACGTGCATTGACATGGATTGGAAGGTGCTCACATGGCTTCGTTACACTC
TGTGGATTCCCTTATATCCACTGGGATGTTTGGCGGAAGCTGTCTCAGTGATTCAGTCCATTCCAATATT
CAATGAGACCGGACGATTCAGTTTCACATTGCCATATCCAGTGAAAATCAAAGTTAGATTTTCCTTTTTT
CTTCAGATTTATCTTATAATGATATTTTTAGGTTTATACATAAATTTTCGTCACCTTTATAAACAGCGCA
GACGGCGCTATGGACAAAAAAAGAAAAAGATCCACTAA

Translation (245 aa):
MELRAKEEERLNKLRLESEGSPETLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTV
ADMMYFCQMLAVVETINAAIGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIF
RYSFYMLTCIDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFF
LQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKKIH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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