NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92027.1 Public Homo sapiens 15 MEGF11 24 110 108 CCDS HistoryNCBI Gene:84465Re-query CCDS DB by CCDS ID:92027.1Re-query CCDS DB by GeneID:84465See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92027.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395614.6 ENSP00000378976.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395614.6Link to Ensembl Protein Viewer:ENSP00000378976.2Re-query CCDS DB by Nucleotide ID:ENST00000395614Re-query CCDS DB by Protein ID:ENSP00000378976
Original member Current member NCBI NM_001385028.1 NP_001371957.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385028.1Link to Protein Sequence:NP_001371957.1Re-query CCDS DB by Nucleotide ID:NM_001385028Re-query CCDS DB by Protein ID:NP_001371957Link to BLAST:NP_001371957.1

Chromosomal Locations for CCDS 92027.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65897934 65898094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65898728 65898934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65906085 65906141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65909034 65909135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65909740 65909806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65912082 65912200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65913737 65913973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65915470 65915598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65916148 65916276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65916828 65916956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65917966 65918094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65922338 65922472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65922823 65922969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65928425 65928527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65929720 65929883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65930823 65930943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65957547 65957721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65964908 65965120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65970553 65970689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65980778 65980898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65982242 65982488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66094402 66094494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66119086 66119186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66123899 66124000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66128306 66128403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3423 nt):
ATGGTGCTCTCCCTGACGGGGCTCATTGCCTTCTCCTTCCTGCAAGCCACCCTTGCCCTGAACCCCGAGG
ACCCCAACGTGTGCAGCCACTGGGAGAGCTATGCTGTGACTGTCCAGGAATCGTATGCACACCCCTTCGA
TCAGATCTATTACACACGATGCACAGACATCCTCAACTGGTTCAAGTGCACCAGGCACCGGATCAGTTAT
AAGACGGCGTATCGGAGAGGCCTCCGGACCATGTACCGGCGGAGGTCCCAGTGCTGCCCTGGCTACTATG
AGAGCGGAGACTTCTGCATACCCCTGTGTACGGAGGAGTGTGTGCACGGCCGCTGCGTTTCCCCGGACAC
CTGCCACTGCGAGCCTGGCTGGGGAGGGCCCGACTGCTCCAGCGGCTGCGACAGCGACCACTGGGGGCCC
CACTGCAGCAACCGGTGCCAGTGCCAGAACGGCGCCCTGTGTAACCCCATCACAGGCGCCTGCGTGTGCG
CCGCCGGCTTCCGTGGATGGCGCTGCGAGGAGCTCTGCGCACCTGGCACCCACGGCAAGGGATGCCAGCT
GCCGTGCCAGTGCCGACACGGTGCCAGCTGCGACCCCCGCGCCGGCGAGTGCCTCTGCGCACCTGGCTAC
ACCGGCGTCTACTGCGAGGAGCTGTGCCCTCCTGGGAGCCATGGAGCTCACTGTGAGCTGCGCTGCCCCT
GTCAGAATGGGGGCACCTGCCACCACATCACTGGCGAGTGTGCCTGCCCCCCAGGCTGGACGGGAGCAGT
GTGTGCCCAGCCCTGCCCACCAGGGACATTTGGCCAGAACTGCAGCCAGGATTGTCCTTGCCACCATGGA
GGGCAGTGTGACCACGTGACTGGACAGTGCCACTGTACAGCTGGATACATGGGGGACAGGTGCCAAGAGG
AGTGCCCCTTCGGGTCCTTCGGCTTCCAGTGCTCACAGCACTGTGACTGCCACAATGGGGGGCAGTGTTC
ACCCACCACGGGTGCCTGCGAGTGTGAGCCTGGCTACAAGGGCCCACGCTGCCAGGAGCGACTGTGCCCG
GAGGGCCTGCATGGCCCAGGCTGCACCCTGCCCTGCCCCTGTGACGCTGACAACACCATCAGCTGCCACC
CAGTAACTGGAGCTTGTACCTGCCAGCCAGGCTGGTCTGGTCACCACTGCAATGAATCCTGCCCTGTTGG
CTACTATGGCGATGGCTGCCAGCTGCCTTGCACCTGTCAGAATGGCGCCGACTGCCACAGCATCACTGGG
GGCTGCACTTGTGCTCCGGGCTTCATGGGAGAGGTCTGTGCCGTTTCCTGTGCAGCAGGGACCTATGGCC
CCAACTGCTCGTCCATCTGTAGCTGTAACAATGGTGGCACCTGCTCCCCAGTAGATGGCTCCTGTACCTG
CAAGGAAGGGTGGCAGGGCCTGGACTGCACCCTGCCATGTCCCAGTGGGACGTGGGGCCTGAACTGCAAC
GAGAGCTGCACCTGTGCCAATGGGGCAGCCTGCAGCCCCATAGACGGCTCCTGCTCCTGCACTCCTGGCT
GGCTGGGAGACACCTGTGAGCTGCCTTGCCCGGATGGCACATTTGGGCTGAACTGCAGTGAACACTGTGA
CTGCAGCCATGCTGATGGATGTGACCCCGTCACAGGCCACTGCTGCTGCCTGGCCGGATGGACAGGCATC
CGCTGTGACAGCACGTGTCCACCTGGCCGCTGGGGCCCCAACTGCTCTGTCTCCTGCAGCTGTGAGAATG
GAGGCTCCTGCTCCCCAGAGGATGGGAGCTGCGAGTGTGCCCCTGGCTTCCGAGGACCCTTATGCCAGAG
AATCTGCCCCCCTGGGTTCTATGGCCACGGCTGCGCCCAGCCATGCCCCCTCTGCGTGCACAGCAGCAGG
CCCTGCCACCACATCAGCGGCATCTGTGAGTGCCTCCCAGGATTCTCTGGAGCTCTCTGCAACCAAGTGT
GTGCTGGAGGATACTTTGGGCAGGACTGTGCCCAGCTCTGCTCCTGTGCCAACAACGGGACCTGCAGCCC
TATCGATGGCTCCTGCCAGTGCTTTCCTGGATGGATTGGCAAGGACTGCTCACAGGCTTGCCCACCCGGG
TTCTGGGGCCCCGCCTGCTTCCACGCATGCAGCTGCCACAACGGGGCGAGCTGCAGCGCCGAGGACGGGG
CCTGCCACTGCACCCCTGGCTGGACTGGACTCTTCTGCACACAGCGCTGCCCAGCAGCATTTTTTGGGAA
GGACTGTGGGCGCGTATGCCAGTGTCAGAATGGCGCCAGCTGTGACCACATCAGTGGCAAGTGCACCTGC
CGCACAGGCTTCACCGGGCAACACTGTGAGCAGAGATGTGCCCCAGGAACCTTTGGCTATGGGTGTCAGC
AGCTATGTGAGTGCATGAACAACTCCACCTGTGACCATGTCACCGGCACCTGTTACTGCAGCCCTGGCTT
CAAAGGAATCAGGTGTGACCAAGCTGCCCTCATGATGGAGGAGCTGAATCCCTACACCAAGATCAGCCCA
GCACTGGGTGCAGAGCGGCACTCGGTGGGTGCTGTCACAGGCATCATGCTCCTGTTATTCCTCATTGTGG
TGCTGCTGGGCCTATTTGCCTGGCATCGGCGGCGGCAGAAAGAGAAGGGCCGAGACCTGGCTCCCCGTGT
CTCCTACACACCTGCCATGAGGATGACCAGCACCGACTACTCCCTCTCAGATTTGTCTCAAAGTAGCAGC
CATGCCCACTGCTTTTCCAATTCCAGCTACCACGCACTGGCATGTGGGGGGCCTGCCACCAGCCAGGCCA
GCACTCTGGACAGGAACAGCCCCACCAAGCTCAGTAACAAGTCCCTTGACAGAGACACAGCAGGCTGGAC
CCCCTACAGCTATGTGAACGTGTTAGACTCCCATTTCCAGATCAGTGCCCTGGAGGCCAGGTACCCGCCC
GAGGACTTCTACATTGAACTTAGACACCTCAGCCGCCCCGCTGAGCCACACTCACCAGGTGCTTGTGGAA
TGGATAGACGTCAGAACACATACATTATGGACAAAGGCTTCAAAGATTACATGAAAGAATCCGTGTGCAG
TTCTAGTACTTGTTCCTTGAATAGCAGTGAAAACCCTTACGCCACAATTAAGGACCCACCCATCCTCACC
TGCAAGCTTCCAGAAAGCAGCTATGTAGAAATGAAGTCGCCTGTGCACATGGGGTCTCCGTACACAGATG
TGCCATCCTTGTCGACATCTAATAAAAATATATATGAAGTTGAGCCCACAGTCAGTGTGGTCCAAGAAGG
TTGCGGTCATAACTCCAGCTATATCCAGAATGCATACGACCTACCTAGGAACAGCCATATTCCTGGTCAT
TATGACCTCCTCCCAGTAAGACAGAGCCCTGCCAATGGGCCGTCCCAGGACAAGCAATCTTAA

Translation (1140 aa):
MVLSLTGLIAFSFLQATLALNPEDPNVCSHWESYAVTVQESYAHPFDQIYYTRCTDILNWFKCTRHRISY
KTAYRRGLRTMYRRRSQCCPGYYESGDFCIPLCTEECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGP
HCSNRCQCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAPGY
TGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHG
GQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQERLCP
EGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITG
GCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCN
ESCTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGI
RCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSSR
PCHHISGICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGKDCSQACPPG
FWGPACFHACSCHNGASCSAEDGACHCTPGWTGLFCTQRCPAAFFGKDCGRVCQCQNGASCDHISGKCTC
RTGFTGQHCEQRCAPGTFGYGCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCDQAALMMEELNPYTKISP
ALGAERHSVGAVTGIMLLLFLIVVLLGLFAWHRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSDLSQSSS
HAHCFSNSSYHALACGGPATSQASTLDRNSPTKLSNKSLDRDTAGWTPYSYVNVLDSHFQISALEARYPP
EDFYIELRHLSRPAEPHSPGACGMDRRQNTYIMDKGFKDYMKESVCSSSTCSLNSSENPYATIKDPPILT
CKLPESSYVEMKSPVHMGSPYTDVPSLSTSNKNIYEVEPTVSVVQEGCGHNSSYIQNAYDLPRNSHIPGH
YDLLPVRQSPANGPSQDKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH