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Report for CCDS92031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92031.1 Public Homo sapiens 15 CALML4 24 110 108 CCDS HistoryNCBI Gene:91860Re-query CCDS DB by CCDS ID:92031.1Re-query CCDS DB by GeneID:91860See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92031.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540479.6 ENSP00000438177.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540479.6Link to Ensembl Protein Viewer:ENSP00000438177.2Re-query CCDS DB by Nucleotide ID:ENST00000540479Re-query CCDS DB by Protein ID:ENSP00000438177
Original member Current member NCBI NM_001286695.1 NP_001273624.1 Accepted alive Link to Nucleotide Sequence:NM_001286695.1Link to Protein Sequence:NP_001273624.1Re-query CCDS DB by Nucleotide ID:NM_001286695Re-query CCDS DB by Protein ID:NP_001273624Link to BLAST:NP_001273624.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273624.1 81 Q96GE6-3 81 100% 0 0

Chromosomal Locations for CCDS 92031.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68194015 68194112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68197440 68197587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (246 nt):
ATGCACATGCAAATAAAACAAGAAGACCCAAAGAAAGAAATTCTTCTAGCCATGTTGATGGTGGACAAGG
AGAAGAAAGGTTACGTCATGGCGTCCGACCTGCGGTCAAAACTCACGAGTCTGGGGGAGAAGCTCACCCA
CAAGGAAGTGGATGATCTCTTCAGGGAAGCAGATATCGAACCCAATGGCAAAGTGAAGTATGATGAATTT
ATCCACAAGATCACCCTTCCTGGACGGGACTATTGA

Translation (81 aa):
MHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEF
IHKITLPGRDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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