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Report for CCDS92068.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92068.1 Public Homo sapiens 15 MEF2A 24 110 108 CCDS HistoryNCBI Gene:4205Re-query CCDS DB by CCDS ID:92068.1Re-query CCDS DB by GeneID:4205See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92068.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338042.11 ENSP00000337202.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338042.11Link to Ensembl Protein Viewer:ENSP00000337202.8Re-query CCDS DB by Nucleotide ID:ENST00000338042Re-query CCDS DB by Protein ID:ENSP00000337202
Original member Current member EBI ENST00000690055.1 ENSP00000509700.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690055.1Link to Ensembl Protein Viewer:ENSP00000509700.1Re-query CCDS DB by Nucleotide ID:ENST00000690055Re-query CCDS DB by Protein ID:ENSP00000509700
Original member Current member EBI ENST00000705985.1 ENSP00000516195.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000705985.1Link to Ensembl Protein Viewer:ENSP00000516195.1Re-query CCDS DB by Nucleotide ID:ENST00000705985Re-query CCDS DB by Protein ID:ENSP00000516195
Original member Current member NCBI NM_001365201.3 NP_001352130.1 Accepted alive Link to Nucleotide Sequence:NM_001365201.3Link to Protein Sequence:NP_001352130.1Re-query CCDS DB by Nucleotide ID:NM_001365201Re-query CCDS DB by Protein ID:NP_001352130Link to BLAST:NP_001352130.1
Original member Current member NCBI NM_001365202.3 NP_001352131.1 Accepted alive Link to Nucleotide Sequence:NM_001365202.3Link to Protein Sequence:NP_001352131.1Re-query CCDS DB by Nucleotide ID:NM_001365202Re-query CCDS DB by Protein ID:NP_001352131Link to BLAST:NP_001352131.1

Chromosomal Locations for CCDS 92068.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99633120 99633173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99645561 99645764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99671520 99671669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99674393 99674612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99675399 99675458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99690241 99690428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99703362 99703385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99706729 99706855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99710634 99710760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99712390 99712771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGA
GAAAGTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCAT
TTTCAACAGCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACA
GAATATAATGAACCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACA
GAGGGTGCGACAGCCCAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAA
AATTAATGAGGAATTTGATAATATGATGCGGAATCATAAAATCGCAGTGAGTACTAAACCTGGTCTGCCA
CCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAG
GGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACC
TCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGT
GGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTCCAGTGGGGAATGGATTTG
TAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCTACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTAC
AAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGAACAGTAGGAAACCAGATCTTCGAGTTGTC
ATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTATCGGAGGAAGAGGAATTGGAGTTGAATACCCAGA
GGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAAGCTTGCC
TCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCTGAC
CTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGC
ACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATC
CATTAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCA
TCGGGCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCAC
AACCCCCGCAGCCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAG
CTCCTATGATGGCAGTGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCC
CCAAACACTGAGGACAGAGAAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACCTAA

Translation (511 aa):
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYT
EYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMRNHKIAVSTKPGLP
PQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLTDSSMLSPPQTTLHRNVSPGAPQRPPSTGNAG
GMLSTTDLTVPNGAGSSPVGNGFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGGNLGMNSRKPDLRVV
IPPSSKGMMPPLSEEEELELNTQRISSSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSAD
LSALQGFNSPGMLSLGQVSAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNISIKSEPISPPRDRMTP
SGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRP
PNTEDRESPSVKRMRMDAWVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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