NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS92328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92328.1 Public Homo sapiens 17 PTGES3L 24 110 108 CCDS HistoryNCBI Gene:100885848Re-query CCDS DB by CCDS ID:92328.1Re-query CCDS DB by GeneID:100885848See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92328.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591916.7 ENSP00000467778.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000591916.7Link to Ensembl Protein Viewer:ENSP00000467778.2Re-query CCDS DB by Nucleotide ID:ENST00000591916Re-query CCDS DB by Protein ID:ENSP00000467778
Original member Current member NCBI NM_001261430.2 NP_001248359.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001261430.2Link to Protein Sequence:NP_001248359.2Re-query CCDS DB by Nucleotide ID:NM_001261430Re-query CCDS DB by Protein ID:NP_001248359Link to BLAST:NP_001248359.2

Chromosomal Locations for CCDS 92328.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42969148 42969186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42970289 42970342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42971607 42971696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42979170 42979268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42979378 42979444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42979550 42979663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42980046 42980053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGCACGGCAGCACGCCCGGACCTTGTGGTACGACAGGCCCAGGTATGTGTTCATGGAGTTTTGTGTTG
AGGACAGCACCGATGTCCACGTGCTTATTGAGGATCACCGCATTGTGTTCAGCTGCAAGAATGCCGATGG
AGTGGAGTTGTACAATGAGATTGAGTTCTATGCCAAAGTGAACTCCAAGGACTCCCAGGATAAGCGCTCT
TCCCGCTCTATTACTTGTTTTGTGAGAAAATGGAAGGAAAAGGTGGCCTGGCCGCGGCTTACCAAGGAGG
ATATCAAGCCAGTGTGGCTGTCTGTGGACTTTGATAACTGGAGAGACTGGGAAGGGGATGAAGAGATGGA
GCTGGCTCATGTGGAACATTATGCAGAGCTTTTGAAGAAGGTCAGCACCAAGAGACCTCCACCTGCCATG
GATGATTTGGATGATGATTCTGACAGTGCTGATGATGCAACAAGTAATTAA

Translation (156 aa):
MARQHARTLWYDRPRYVFMEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRS
SRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAM
DDLDDDSDSADDATSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH