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Report for CCDS9242.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9242.1 Public Homo sapiens 12 PITPNM2 24 110 108 CCDS HistoryNCBI Gene:57605Re-query CCDS DB by CCDS ID:9242.1Re-query CCDS DB by GeneID:57605See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9242.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320201.10 ENSP00000322218.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320201.10Link to Ensembl Protein Viewer:ENSP00000322218.4Re-query CCDS DB by Nucleotide ID:ENST00000320201Re-query CCDS DB by Protein ID:ENSP00000322218
Original member Current member NCBI NM_020845.3 NP_065896.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020845.3Link to Protein Sequence:NP_065896.1Re-query CCDS DB by Nucleotide ID:NM_020845Re-query CCDS DB by Protein ID:NP_065896Link to BLAST:NP_065896.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065896.1 1349 Q9BZ72-1 1349 100% 0 0

Chromosomal Locations for CCDS 9242.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 122986027 122986350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122986436 122986564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122986646 122986829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122987281 122987430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122987511 122987659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122987785 122987901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122988234 122988350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122988724 122988872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122989787 122989948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122990545 122990709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122992499 122992669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122994801 122994979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122995389 122995660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122996458 122996577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122996721 122996910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122997325 122997572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123000778 123000848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123001054 123001158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123004394 123004489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123005240 123005548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123009850 123010077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123012613 123012734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123013828 123014042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123034513 123034590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4050 nt):
ATGATTATAAAGGAATATCGGATTCCTCTGCCAATGACCGTGGAGGAGTACCGCATCGCCCAGCTGTACA
TGATACAGAAGAAGAGCCGTAACGAGACATATGGCGAAGGCAGCGGCGTGGAGATCCTGGAGAACCGGCC
GTACACAGATGGCCCAGGCGGCTCTGGGCAGTACACACACAAGGTGTATCATGTGGGCATGCACATTCCC
AGCTGGTTCCGCTCCATCCTGCCCAAGGCAGCCCTGCGGGTGGTGGAGGAGTCTTGGAATGCCTACCCCT
ACACCCGAACCAGGTTCACCTGTCCTTTCGTGGAGAAATTCTCCATCGACATTGAAACCTTTTATAAAAC
TGATGCTGGAGAAAACCCCGACGTGTTCAACCTCTCTCCTGTGGAAAAGAACCAGCTGACAATCGACTTC
ATCGACATTGTCAAAGACCCTGTGCCCCACAACGAGTATAAGACAGAAGAGGACCCCAAGCTGTTCCAGT
CAACCAAGACCCAGCGGGGGCCCCTGTCCGAGAACTGGATCGAGGAGTACAAGAAGCAGGTCTTCCCCAT
CATGTGCGCATACAAGCTCTGCAAGGTGGAGTTCCGCTACTGGGGCATGCAGTCCAAGATCGAGAGGTTC
ATCCACGACACCGGACTACGGAGGGTGATGGTGCGGGCTCACCGGCAGGCCTGGTGCTGGCAGGACGAGT
GGTATGGGCTGAGCATGGAGAACATCCGGGAGCTGGAGAAGGAGGCACAGCTCATGCTTTCCCGTAAGAT
GGCCCAGTTCAATGAGGATGGTGAGGAGGCCACTGAGCTCGTCAAGCACGAAGCCGTCTCGGACCAGACC
TCTGGGGAGCCCCCGGAGCCCAGCAGCAGCAATGGGGAGCCCCTAGTGGGGCGCGGCCTCAAGAAACAGT
GGTCCACATCCTCCAAGTCGTCTCGGTCGTCCAAGCGGGGAGCGAGTCCTTCCCGCCACAGCATCTCAGA
GTGGAGGATGCAGAGTATTGCCAGGGACTCGGATGAGAGCTCAGATGATGAGTTCTTCGATGCGCACGAG
GACCTGTCCGACACAGAGGAAATGTTCCCCAAGGACATCACCAAGTGGAGCTCCAATGACCTCATGGACA
AGATCGAGAGCCCAGAGCCGGAAGACACACAAGATGGTCTGTACCGCCAGGGTGCCCCTGAGTTCAGGGT
GGCCTCCAGTGTGGAGCAGCTGAACATCATAGAGGACGAGGTTAGCCAGCCGCTGGCTGCACCGCCCTCC
AAGATCCACGTGCTGCTACTGGTGCTGCACGGAGGCACCATCCTGGACACAGGCGCCGGGGACCCCAGCT
CCAAGAAGGGCGATGCTAACACCATCGCCAACGTGTTCGACACCGTCATGCGCGTGCACTACCCCAGCGC
CCTGGGCCGCCTTGCCATCCGCCTGGTGCCCTGCCCGCCCGTCTGCTCTGACGCCTTTGCCCTGGTCTCC
AACCTCAGCCCCTACAGCCATGACGAAGGCTGTCTGTCCAGCAGTCAGGACCACATTCCCCTGGCTGCCC
TCCCCCTGCTGGCCACCTCCTCCCCCCAGTACCAGGAGGCAGTTGCCACAGTGATTCAGCGAGCCAACCT
TGCCTATGGGGACTTCATCAAGTCCCAGGAGGGCATGACCTTCAATGGGCAGGTCTGCCTGATTGGGGAC
TGCGTCGGGGGCATCCTGGCATTTGATGCCCTGTGCTACAGTAACCAGCCGGTGTCTGAGAGTCAGAGCA
GCAGCCGCCGGGGCAGCGTGGTCAGCATGCAGGACAATGACCTGCTGTCCCCGGGCATCCTGATGAATGC
AGCACACTGCTGCGGTGGTGGCGGTGGCGGCGGTGGCGGTGGTGGCAGCAGTGGTGGTGGTGGCAGTAGT
GGTGGCTCCAGCCTGGAGAGCAGTCGGCACCTGAGCCGAAGCAACGTCGACATCCCCCGCAGCAACGGCA
CTGAGGACCCCAAAAGGCAACTGCCCCGCAAGAGGAGCGACTCATCCACCTACGAGCTGGATACCATCCA
GCAGCACCAGGCCTTCCTGTCCAGCCTCCATGCCAGCGTGCTGAGGACTGAGCCCTGCTCACGCCATTCC
AGCAGCTCCACCATGCTGGATGGCACAGGTGCCCTGGGCAGGTTTGACTTTGAGATCACCGACCTCTTCC
TCTTCGGGTGCCCGCTGGGGCTGGTCCTGGCCTTGAGGAAGACTGTCATCCCAGCCCTGGATGTTTTCCA
GCTGCGGCCGGCCTGCCAGCAAGTCTACAACCTCTTCCACCCCGCGGACCCGTCAGCTTCACGCCTGGAG
CCGCTGCTGGAACGGCGCTTTCACGCCCTGCCGCCTTTCAGCGTCCCCCGCTACCAACGCTACCCGCTGG
GGGATGGCTGCTCCACGCTGCTGGCGGATGTGCTCCAGACCCACAATGCAGCCTTCCAAGAGCATGGCGC
CCCCTCCTCGCCGGGCACTGCCCCTGCCAGTCGTGGCTTCCGCCGAGCCAGTGAGATCAGCATCGCCAGC
CAGGTGTCAGGCATGGCTGAGAGCTACACGGCATCCAGCATCGCCCAGAAGGCCCCCGATGCGCTCAGCC
ATACCCCCAGCGTCAGGCGTCTGTCCCTGCTCGCCCTGCCCGCCCCCAGCCCCACCACCCCTGGCCCCCA
CCCTCCAGCCAGGAAGGCAAGCCCTGGCCTGGAGAGGGCCCCTGGCCTCCCTGAGCTGGACATTGGAGAA
GTCGCTGCAAAGTGGTGGGGCCAGAAGCGGATCGACTACGCCCTGTACTGCCCTGACGCCCTCACGGCCT
TCCCCACGGTGGCTCTGCCTCACCTCTTCCACGCCAGCTACTGGGAGTCAACAGACGTGGTCTCCTTTCT
GCTGAGACAGGTCATGAGGCATGACAACTCCAGCATCTTGGAGCTGGATGGCAAGGAAGTGTCGGTGTTC
ACCCCCTCAAAGCCAAGGGAGAAGTGGCAGCGCAAGCGGACCCACGTGAAGCTGCGGAACGTGACGGCCA
ACCACCGGATCAATGATGCCCTTGCCAATGAGGACGGCCCCCAGGTTCTGACGGGCAGGTTCATGTATGG
GCCCCTGGACATGGTCACCCTGACTGGGGAGAAGGTGGATGTGCACATCATGACCCAGCCGCCCTCAGGC
GAGTGGCTCTACCTGGATACGCTGGTGACCAACAACAGTGGGCGTGTCTCCTACACCATCCCTGAGTCGC
ACCGCCTGGGCGTGGGTGTCTACCCTATCAAGATGGTGGTCAGGGGAGACCACACGTTTGCCGACAGCTA
CATCACCGTGCTGCCCAAGGGCACAGAGTTCGTGGTCTTCAGCATCGACGGTTCCTTTGCCGCTAGCGTG
TCCATCATGGGCAGCGACCCCAAGGTGCGGGCCGGGGCCGTGGACGTGGTGCGGCACTGGCAGGACCTGG
GCTACCTCATCATCTACGTGACGGGCCGGCCCGACATGCAGAAGCAGCGGGTGGTGGCGTGGCTGGCCCA
GCACAACTTCCCCCATGGCGTGGTGTCCTTCTGTGACGGCCTGGTGCATGACCCGCTGCGGCACAAGGCC
AACTTCCTGAAGCTGCTCATCTCCGAGCTGCACCTGCGCGTGCACGCGGCCTATGGCTCCACCAAGGACG
TGGCGGTGTACAGCGCCATTAGCCTGTCCCCCATGCAGATCTACATCGTGGGCCGGCCCACCAAGAAGCT
GCAGCAGCAGTGCCAGTTCATCACGGATGGCTACGCGGCCCACCTGGCGCAGCTGAAGTACAGCCACCGG
GCGCGGCCCGCTCGCAACACGGCCACCCGCATGGCGCTGCGCAAGGGCAGCTTCGGCCTGCCCGGCCAGG
GCGACTTTCTGCGCTCCCGGAACCACCTGCTTCGCACCATCTCGGCCCAGCCCAGCGGGCCCAGCCACCG
GCACGAGCGGACACAGAGCCAGGCGGATGGCGAGCAGCGGGGCCAGCGCAGCATGAGTGTGGCGGCCGGC
TGCTGGGGCCGCGCCATGACTGGCCGCCTGGAGCCGGGGGCAGCCGCGGGCCCCAAGTAG

Translation (1349 aa):
MIIKEYRIPLPMTVEEYRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGPGGSGQYTHKVYHVGMHIP
SWFRSILPKAALRVVEESWNAYPYTRTRFTCPFVEKFSIDIETFYKTDAGENPDVFNLSPVEKNQLTIDF
IDIVKDPVPHNEYKTEEDPKLFQSTKTQRGPLSENWIEEYKKQVFPIMCAYKLCKVEFRYWGMQSKIERF
IHDTGLRRVMVRAHRQAWCWQDEWYGLSMENIRELEKEAQLMLSRKMAQFNEDGEEATELVKHEAVSDQT
SGEPPEPSSSNGEPLVGRGLKKQWSTSSKSSRSSKRGASPSRHSISEWRMQSIARDSDESSDDEFFDAHE
DLSDTEEMFPKDITKWSSNDLMDKIESPEPEDTQDGLYRQGAPEFRVASSVEQLNIIEDEVSQPLAAPPS
KIHVLLLVLHGGTILDTGAGDPSSKKGDANTIANVFDTVMRVHYPSALGRLAIRLVPCPPVCSDAFALVS
NLSPYSHDEGCLSSSQDHIPLAALPLLATSSPQYQEAVATVIQRANLAYGDFIKSQEGMTFNGQVCLIGD
CVGGILAFDALCYSNQPVSESQSSSRRGSVVSMQDNDLLSPGILMNAAHCCGGGGGGGGGGGSSGGGGSS
GGSSLESSRHLSRSNVDIPRSNGTEDPKRQLPRKRSDSSTYELDTIQQHQAFLSSLHASVLRTEPCSRHS
SSSTMLDGTGALGRFDFEITDLFLFGCPLGLVLALRKTVIPALDVFQLRPACQQVYNLFHPADPSASRLE
PLLERRFHALPPFSVPRYQRYPLGDGCSTLLADVLQTHNAAFQEHGAPSSPGTAPASRGFRRASEISIAS
QVSGMAESYTASSIAQKAPDALSHTPSVRRLSLLALPAPSPTTPGPHPPARKASPGLERAPGLPELDIGE
VAAKWWGQKRIDYALYCPDALTAFPTVALPHLFHASYWESTDVVSFLLRQVMRHDNSSILELDGKEVSVF
TPSKPREKWQRKRTHVKLRNVTANHRINDALANEDGPQVLTGRFMYGPLDMVTLTGEKVDVHIMTQPPSG
EWLYLDTLVTNNSGRVSYTIPESHRLGVGVYPIKMVVRGDHTFADSYITVLPKGTEFVVFSIDGSFAASV
SIMGSDPKVRAGAVDVVRHWQDLGYLIIYVTGRPDMQKQRVVAWLAQHNFPHGVVSFCDGLVHDPLRHKA
NFLKLLISELHLRVHAAYGSTKDVAVYSAISLSPMQIYIVGRPTKKLQQQCQFITDGYAAHLAQLKYSHR
ARPARNTATRMALRKGSFGLPGQGDFLRSRNHLLRTISAQPSGPSHRHERTQSQADGEQRGQRSMSVAAG
CWGRAMTGRLEPGAAAGPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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