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Report for CCDS92480.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92480.1 Public Homo sapiens 19 PWWP3A 24 110 108 CCDS HistoryNCBI Gene:84939Re-query CCDS DB by CCDS ID:92480.1Re-query CCDS DB by GeneID:84939See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 92480.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587460.6 ENSP00000465838.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587460.6Link to Ensembl Protein Viewer:ENSP00000465838.2Re-query CCDS DB by Nucleotide ID:ENST00000587460Re-query CCDS DB by Protein ID:ENSP00000465838
Original member Current member EBI ENST00000591433.6 ENSP00000468322.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591433.6Link to Ensembl Protein Viewer:ENSP00000468322.2Re-query CCDS DB by Nucleotide ID:ENST00000591433Re-query CCDS DB by Protein ID:ENSP00000468322
Original member Current member EBI ENST00000588810.6 ENSP00000468557.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588810.6Link to Ensembl Protein Viewer:ENSP00000468557.2Re-query CCDS DB by Nucleotide ID:ENST00000588810Re-query CCDS DB by Protein ID:ENSP00000468557
Original member Current member NCBI NM_001369796.1 NP_001356725.1 Accepted alive Link to Nucleotide Sequence:NM_001369796.1Link to Protein Sequence:NP_001356725.1Re-query CCDS DB by Nucleotide ID:NM_001369796Re-query CCDS DB by Protein ID:NP_001356725Link to BLAST:NP_001356725.1
Original member Current member NCBI NM_001369797.1 NP_001356726.1 Accepted alive Link to Nucleotide Sequence:NM_001369797.1Link to Protein Sequence:NP_001356726.1Re-query CCDS DB by Nucleotide ID:NM_001369797Re-query CCDS DB by Protein ID:NP_001356726Link to BLAST:NP_001356726.1

Chromosomal Locations for CCDS 92480.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1356393 1356449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1357009 1357094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1358394 1358464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1358588 1358610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (237 nt):
ATGGCGGATGCCAAGTATGTCCTCTGCCGATGGGAAAAGCGATTATGGCCTGCGAAGGTTTTGGCCCGAA
CCGCGACTTCAACAAAAAATAAGAGAAGAAAGGAATATTTTCTAGCTGTGCAAATCCTCTCTCTAGAGGA
AAAAATTAAGGTGAAAAGCACTGAAGTTGAGATCCTAGAGAAGTCTCAAATTGAAGCCATTGCTTCCTCG
TTAGGGAACGCGAATCCCCTGAGCTGA

Translation (78 aa):
MADAKYVLCRWEKRLWPAKVLARTATSTKNKRRKEYFLAVQILSLEEKIKVKSTEVEILEKSQIEAIASS
LGNANPLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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