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Report for CCDS92567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92567.1 Public Homo sapiens 19 PDE4C 24 110 108 CCDS HistoryNCBI Gene:5143Re-query CCDS DB by CCDS ID:92567.1Re-query CCDS DB by GeneID:5143See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 92567.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539010.5 ENSP00000439470.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539010.5Link to Ensembl Protein Viewer:ENSP00000439470.1Re-query CCDS DB by Nucleotide ID:ENST00000539010Re-query CCDS DB by Protein ID:ENSP00000439470
Original member Current member NCBI NM_001369701.2 NP_001356630.1 Accepted alive Link to Nucleotide Sequence:NM_001369701.2Link to Protein Sequence:NP_001356630.1Re-query CCDS DB by Nucleotide ID:NM_001369701Re-query CCDS DB by Protein ID:NP_001356630Link to BLAST:NP_001356630.1

Chromosomal Locations for CCDS 92567.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18210929 18211276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18211759 18211941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18213368 18213490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18216741 18216895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18218149 18218248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18218334 18218498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18218940 18219038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18219234 18219397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18220226 18220319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18220403 18220417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAGCCGCTCCG
GGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCTGCCCAAGGT
GACCGCTGAGGAGGCCCCACAGCCCATGTCCCGGATCAGTGGCCTACATGGGCTCTGCCACAGTGCCAGC
CTCTCCTCAGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAG
AAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAGTGGGAACCGGCCCCTCACAGC
TATCATATTCAGCATTTTTCAGGAGCGGGACCTGCTGAAGACATTCCAGATCCCAGCAGACACACTGGCC
ACCTACCTGCTGATGCTGGAAGGTCACTACCACGCCAATGTGGCCTACCACAACAGCCTACATGCCGCCG
ACGTGGCCCAGTCCACGCATGTGCTGCTGGCTACGCCCGCCCTCGAGGCTGTGTTCACAGACTTGGAAAT
CCTGGCTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACCATCCTGGGGTCTCCAACCAGTTTCTGATT
AACACCAACTCAGAGCTGGCGCTTATGTACAACGACGCCTCGGTGCTGGAGAACCATCACCTGGCTGTGG
GCTTCAAGCTGCTGCAGGCAGAGAACTGCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT
GCGCAGGATGGTCATTGACATGGTGCTGGCCACAGACATGTCCAAACACATGAACCTCCTGGCCGACCTC
AAGACCATGGTGGAGACCAAGAAGGTGACAAGCCTCGGTGTCCTCCTCCTGGACAACTATTCCGACCGAA
TCCAGGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAGCAACCCCACCAAGCCGCTGCCCCTGTACCG
CCAGTGGACGGACCGCATCATGGCCGAGTTCTTCCAGCAGGGAGACCGCGAGCGTGAGTCGGGCCTGGAC
ATCAGTCCCATGTGTGACAAGCATACGGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGACTACATTG
CTCACCCACTGTGGGAGACTTGGGCTGACCTGGTCCACCCAGATGCACAGGACCTGCTGGACACGCTGGA
GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGAC
GGGCCTGACAGATTCCAGTTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGG
AGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGC
CGGCCCAGACCCTGGGGACTTACCCCTCGACAACCAGAGGACTTAG

Translation (481 aa):
MASNKFKRILNRELTHLSETSRSGNQVSEYISRTFLDQQTEVELPKVTAEEAPQPMSRISGLHGLCHSAS
LSSATVPRFGVQTDQEEQLAKELEDTNKWGLDVFKVAELSGNRPLTAIIFSIFQERDLLKTFQIPADTLA
TYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGVSNQFLI
NTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRLSLRRMVIDMVLATDMSKHMNLLADL
KTMVETKKVTSLGVLLLDNYSDRIQVLQNLVHCADLSNPTKPLPLYRQWTDRIMAEFFQQGDRERESGLD
ISPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQDLLDTLEDNREWYQSKIPRSPSDLTNPERD
GPDRFQFELTLEEAEEEDEEEEEEGEETALAKEALELPDTELLSPEAGPDPGDLPLDNQRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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