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Report for CCDS92573.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92573.1 Public Homo sapiens 19 ZNF738 24 110 108 CCDS HistoryNCBI Gene:148203Re-query CCDS DB by CCDS ID:92573.1Re-query CCDS DB by GeneID:148203See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92573.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000683779.1 ENSP00000507366.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683779.1Link to Ensembl Protein Viewer:ENSP00000507366.1Re-query CCDS DB by Nucleotide ID:ENST00000683779Re-query CCDS DB by Protein ID:ENSP00000507366
Original member Current member NCBI NM_001355237.2 NP_001342166.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001355237.2Link to Protein Sequence:NP_001342166.1Re-query CCDS DB by Nucleotide ID:NM_001355237Re-query CCDS DB by Protein ID:NP_001342166Link to BLAST:NP_001342166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342166.1 375 Q8NE65-1 375 100% 0 0

Chromosomal Locations for CCDS 92573.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21359141 21359143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21361766 21361858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21375238 21375364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21375869 21375964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21382866 21383674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGACGACCTGAGGTATGGAGTGTATCCTGTCAAGGGGGCAAGTGGATACCCTGGGGCTGAGAGGAATC
TTCTGGAGTACTCTTATTTTGAAAAGGGGCCGTTGACATTTAGGGATGTGGTCATAGAATTCTCTCAGGA
GGAGTGGCAATGCCTGGACACTGCTCAGCAAGATTTGTATAGGAAAGTGATGTTAGAGAACTTCAGAAAC
CTGGTGTTCTTGGGTATTGATGTCTCTAAGCCAGATCTGATCACCTGTCTGGAGCAAGGAAAAGATCCCT
GGAATATGAAGAGACACAGTATGGTAGCCACACCCCCAGTTACATATTCTCATTTTGCCCAGGACCTTTG
GCCACAGCCGGGCATAAAAGATTCTTTCCAAAAAGTGATACTGAGAGAATATGGAAATTATGGACATAAA
GATTTACAGTTAAGAAAAGGCTGTAAAAGTGTGAATGAGTGTAATGTGCAAAAAGAAGGTTATAATGAAC
TAAAAGAGTATTTGACAACTACCCAGAGCAAAATATTTCAATGTGATAAATATGTGAAAGTCTTTCATAA
ATTTTTAAATTCAAATACACATAAGACAAGACATACTGGAAAGAAACCTTTCAAATGTAAAAAATGTGGC
AAATCATTTTGCATGCTTTTACACCTAGGTCAACATAAAATAATTCATATTAGAGAGAATTCTTACCAAT
GTGAAGAATGTGGCAAAGCCTTTAAATGGTTCTCAACCCTTACTAGACACAAGAGAATTCATACTGGAGA
CAAATCCTACAAACATGAAGAATGTGGAAAAGGTTTTAACCACTCCACAACTCTTACTAGACATAAGGTA
ATTCATGCTGGAGAGAAACACTACAAATGTGAAAAATGTGGCAAAGATTTTAAACAGTCCTCACACCTTA
CTAAACATAAGACAATTCATGCTGGAGAGAAACCCTACAAATGTGAAGGATGTGGCAAAGCTTTCTGCCA
ATTCTCATACCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAGGAATGTGGC
AAAGCTTTTAATTGGTACTCACACCTTACCAGACATAAGATAATTCATACTGGAGAGAAACCCTACAAAT
GTGAATAA

Translation (375 aa):
MDDLRYGVYPVKGASGYPGAERNLLEYSYFEKGPLTFRDVVIEFSQEEWQCLDTAQQDLYRKVMLENFRN
LVFLGIDVSKPDLITCLEQGKDPWNMKRHSMVATPPVTYSHFAQDLWPQPGIKDSFQKVILREYGNYGHK
DLQLRKGCKSVNECNVQKEGYNELKEYLTTTQSKIFQCDKYVKVFHKFLNSNTHKTRHTGKKPFKCKKCG
KSFCMLLHLGQHKIIHIRENSYQCEECGKAFKWFSTLTRHKRIHTGDKSYKHEECGKGFNHSTTLTRHKV
IHAGEKHYKCEKCGKDFKQSSHLTKHKTIHAGEKPYKCEGCGKAFCQFSYLTKHKIIHTGEKPYKCEECG
KAFNWYSHLTRHKIIHTGEKPYKCE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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