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Report for CCDS92618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92618.1 Public Homo sapiens 19 CCNP 24 110 108 CCDS HistoryNCBI Gene:79935Re-query CCDS DB by CCDS ID:92618.1Re-query CCDS DB by GeneID:79935See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92618.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599263.6 ENSP00000470643.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599263.6Link to Ensembl Protein Viewer:ENSP00000470643.2Re-query CCDS DB by Nucleotide ID:ENST00000599263Re-query CCDS DB by Protein ID:ENSP00000470643
Current member NCBI NM_001411133.1 NP_001398062.1 Accepted alive Link to Nucleotide Sequence:NM_001411133.1Link to Protein Sequence:NP_001398062.1Re-query CCDS DB by Nucleotide ID:NM_001411133Re-query CCDS DB by Protein ID:NP_001398062Link to BLAST:NP_001398062.1

Chromosomal Locations for CCDS 92618.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40222307 40222472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40223152 40223303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40223388 40223546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40224488 40224643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40224722 40224811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40226375 40226641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGCTGGTGAGAGGCAGGGACCAGGGGTCCGGCTCCCGGCTCGGGCCTATCGTTAGGCGCTGGGCCCCCA
GGCCCTCTCCTTTGCAGAGTCTCGCTGCCTCCCTCGACGCAGAGCCTTCAAGCGCCGCAGTCCCCGACGG
CTTCCCCGCGGGCCCCACTGTCTCCCCAAGACGCCTGGCGAGGCCGCCGGGGCTGGAGGAGGCGCTGAGC
GCGCTGGGGCTGCAGGGAGAACGCGAGTACGCCGGGGACATCTTCGCCGAAGTCATGGTGTGCCGCGTGC
TGCCCCTGAGAGCCCTGCCCCGCGCTGTGACCCCGGAGATGCGCGCCCTGGTGGTAGACTGGCTGGTCCA
GGTGCACGAGTACCTGGGTCTGGCTGGTGACACACTTTATCTGGCGGTTCACCTGCTTGATTCCTACCTG
AGCGCTGGCCGCGTGCGTCTACATCGCCTGCAGCTGCTGGGCGTGGCTTGCCTGTTTGTGGCGTGCAAAA
TGGAAGAGTGCGTGCTTCCCGAGCCCGCCTTCCTCTGCCTCCTGAGCGCGGACTCCTTCTCACGGGCGGA
GCTGCTGCGCGCCGAGCGTCGCATCCTGAGCCGCCTGGATTTCCGGCTGCACCACCCCGGCCCGCTGCTG
TGCCTCGGGCTGCTGGCCGCGCTGGCAGGGAGCAGCCCCCAGGTGATGTTACTTGCCACCTACTTCCTGG
AGCTGTCTTTGCTGGAGGCCGAGGCGGCGGGATGGGAGCCGGGTCGTCGTGCGGCTGCGGCTCTGAGCCT
GGCGCACCGCTTGCTCGACGGGGCGGGCTCCAGGCTCCAGCCAGAACTTTACAGCCCCGAGGAACTGGGC
ACCCTCGAGCCGTGCATGGCCCGCGCTGCGCTCCGAGGTCCCGCGCCGGGTCGCGCCGCAGTCTTCCTCA
AGTATGCGCGGCCCCAGCGCCAGGGGACCAGCCTTGCCGCCGCCTGCCTGCTCCGCCGCCTCCAGTCTGA
GCCTCCCTGA

Translation (329 aa):
MLVRGRDQGSGSRLGPIVRRWAPRPSPLQSLAASLDAEPSSAAVPDGFPAGPTVSPRRLARPPGLEEALS
ALGLQGEREYAGDIFAEVMVCRVLPLRALPRAVTPEMRALVVDWLVQVHEYLGLAGDTLYLAVHLLDSYL
SAGRVRLHRLQLLGVACLFVACKMEECVLPEPAFLCLLSADSFSRAELLRAERRILSRLDFRLHHPGPLL
CLGLLAALAGSSPQVMLLATYFLELSLLEAEAAGWEPGRRAAAALSLAHRLLDGAGSRLQPELYSPEELG
TLEPCMARAALRGPAPGRAAVFLKYARPQRQGTSLAAACLLRRLQSEPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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