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Report for CCDS92642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92642.1 Public Homo sapiens 19 EXOC3L2 24 110 108 CCDS HistoryNCBI Gene:90332Re-query CCDS DB by CCDS ID:92642.1Re-query CCDS DB by GeneID:90332See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92642.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000413988.3 ENSP00000400713.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000413988.3Link to Ensembl Protein Viewer:ENSP00000400713.2Re-query CCDS DB by Nucleotide ID:ENST00000413988Re-query CCDS DB by Protein ID:ENSP00000400713
Original member Current member NCBI NM_001382422.1 NP_001369351.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382422.1Link to Protein Sequence:NP_001369351.1Re-query CCDS DB by Nucleotide ID:NM_001382422Re-query CCDS DB by Protein ID:NP_001369351Link to BLAST:NP_001369351.1

Chromosomal Locations for CCDS 92642.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45213069 45213357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45216073 45216194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45217528 45217683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45218197 45218319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45224778 45224913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45227662 45227772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45227974 45228074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45228165 45228266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45231763 45231874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45234193 45234826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45238523 45239045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2409 nt):
ATGCCTATCCTGAAGAATCTGGGAGTGTCAGACCCTAAGGTGCCCCGGGCGGGGACCCTGCCCCTGAGGT
CCTCTCGGAACCCCTTTGAAGAAGTTTCAGGGCTGGAGGAAGAAGAGGCCGGGGAGCTGGGGTCCCTCCC
CAATGGAACATCTTGTCGCCGCCGCGCCACCCTGGAGAAGCTTGCGGGCCTGGCCCCCTTCCGGCTGGGC
TGGGCCCCGGGCCGGCGGGCAGGCAGCCCTGGGGATGGGCAGCCCCGCTCTTTCTTGGGCCGTGTGCTGG
TACCAGGGATACGCAGGAGCTCAGCAGATTTTGGCCTCCTGGCCCGGCTGCATGGGACCCGAGCCCACGG
CGACGAGGAGGCAGCGGGGGAGGCCGCCCGGAGACTGGCCTTCCTGAGACTGGGGCGTGGATCCAAGCCC
CAGCGTGCGTCCCTGGCTGAGAGAGTGGTGCCTGCAGGCGAGGCAGCTCCAGAGCCCCCACCCAAGGTCC
CAGAGCCCCCAAAGATGAAGGAGCCATTGTCAGTGCTGGAGATCCTGAGCCTGATCCAGCAGCGCGAACT
AGCGCGTGCGGACGAGCACATCCTGGAGCTAGAGGCCGAGGAGCTGGCGCCGTCGAGGGGCGGCGCGCCT
GGGCCTCCCAAGGCCGAGGGCGCTGGCGGGGGCCGCCGGGCGCGGGACGTGGCGCTGCTGTACGAGGCCC
TGCAGCGCGAGCTGTGGGCGCTGGTGCGCGAGACGCTGGCGGGCCCCGGGCCGGGAGCGTGCGCCGGGGC
TGGCGCGGTGGCGCAGCTGGGCCAGGTGCTGGTACAGGAGGAGGCGGCCGACGGGCGTCGGGGTCCCGGG
GCGGCCCGCAAACTACGCGCACGCTGGGCCGAAGCCGTGGCGCGCGCGGCCCGGGAGCGCCTAGAGGCAG
CGGCTCCCGGGGCGCCCGGGGGCCTGGCCGGGCAGCTGGAGGCGCTGCGGGCGCGGCTGCTGGAGGATAT
GGCCGTGGTGCGGGGCCGCCTGGCGCCCGCCTACCCCGCCGGCCTGGGCGCCTTCGGCGTCTACCTGCGC
GGCTACCACGGGGCCCTGGCCGAGTGGCTGGGGGCCTCCGCCCGTCGCAGGCTGCCGCTGGCCGACCGCT
ACGCGCTGCTGCACTGGCACAATCAGGTCTACCCCAGAGAGGTCCTAGGGCTGGTGGACATGGCCGCCCT
GGAGAATGGGGAGCTGGGGCCCCTTCTCTCCCCTGGCACCCTGCGGGGTTTGGAGGATGAATGCGTCACA
GATGTTAAGGCTCAGACCCGGGCTGCCCTTCTCCGTGTGCTGCAGGAGGACGAAGAGCACTGGGGGAGCC
TGGAGGACCAGCCCAGCAGCCTGGCCCAGGATGTGTGTGAGCTGCTGGAAGAGCACACAGAGCGAGCACC
CCGCATCAGCCAGGAGTTTGGGGAGCGGATGGCCCACTGCTGCCTAGGCGGGCTGGCAGAGTTCCTGCAG
AGCTTCCAGCAGCGTGTGGAGCGATTCCATGAGAACCCAGCAGTCCGGGAGATGCTACCTGACACCTATA
TCAGCAAGACCATCGCCCTGGTCAACTGCGGCCCCCCACTGAGAGCTCTGGCCGAGCGCCTGGCCCGGGT
GGGGCCCCCAGAAAGCGAGCCGGCCCGGGAAGCATCTGCTAGTGCTCTGGACCATGTGACCCGGCTCTGC
CACCGTGTCGTGGCCAACCTGCTGTTCCAGGAGCTGCAGCCACACTTCAACAAGCTGATGCGCCGGAAGT
GGCTGAGCAGCCCGGAGGCCCTGGATGGCATCGTGGGCACGCTGGGTGCCCAGGCCCTGGCCCTGCGCAG
AATGCAGGACGAGCCTTACCAGGCGCTGGTAGCCGAGCTACACCGGCGGGCGCTGGTCGAGTACGTGCGG
CCCCTGCTCCGTGGGCGCCTGCGCTGCAGCTCGGCGCGGACCCGCAGCCGCGTGGCCGGCAGGCTCCGGG
AGGACGCGGCGCAACTGCAGAGGCTGTTCCGGCGGCTGGAGTCCCAGGCCTCGTGGCTGGATGCCGTGGT
GCCCCATTTGGCTGAAGTCATGCAGCTGGAAGACACGCCCAGCATCCAGGTGGAGGTGGGAGTGTTGGTG
CGCGACTACCCAGACATCAGGCAGAAGCACGTGGCAGCCCTCCTCGACATCCGTGGCCTGCGCAACACAG
CCGCCCGCCAGGAGATCCTGGCCGTGGCCCGGGACCTGGAACTCTCTGAGGAGGGAGCCCTGTCACCCCC
TCGGGACCGTGCCTTCTTTGCAGACATCCCTGTGCCCCGCCCATCTTTCTGTCTCAGCCTCCCTCTCTTC
CTGGGCCGCCTCCCCCTCTCCCGGCTGGCCAGGCCCAGTTTGGCCTGTCTGCCTCGGCCCCGGCCTCCGT
CTCTAGCGCGACCTCGGGCCCAGCGCTGA

Translation (802 aa):
MPILKNLGVSDPKVPRAGTLPLRSSRNPFEEVSGLEEEEAGELGSLPNGTSCRRRATLEKLAGLAPFRLG
WAPGRRAGSPGDGQPRSFLGRVLVPGIRRSSADFGLLARLHGTRAHGDEEAAGEAARRLAFLRLGRGSKP
QRASLAERVVPAGEAAPEPPPKVPEPPKMKEPLSVLEILSLIQQRELARADEHILELEAEELAPSRGGAP
GPPKAEGAGGGRRARDVALLYEALQRELWALVRETLAGPGPGACAGAGAVAQLGQVLVQEEAADGRRGPG
AARKLRARWAEAVARAARERLEAAAPGAPGGLAGQLEALRARLLEDMAVVRGRLAPAYPAGLGAFGVYLR
GYHGALAEWLGASARRRLPLADRYALLHWHNQVYPREVLGLVDMAALENGELGPLLSPGTLRGLEDECVT
DVKAQTRAALLRVLQEDEEHWGSLEDQPSSLAQDVCELLEEHTERAPRISQEFGERMAHCCLGGLAEFLQ
SFQQRVERFHENPAVREMLPDTYISKTIALVNCGPPLRALAERLARVGPPESEPAREASASALDHVTRLC
HRVVANLLFQELQPHFNKLMRRKWLSSPEALDGIVGTLGAQALALRRMQDEPYQALVAELHRRALVEYVR
PLLRGRLRCSSARTRSRVAGRLREDAAQLQRLFRRLESQASWLDAVVPHLAEVMQLEDTPSIQVEVGVLV
RDYPDIRQKHVAALLDIRGLRNTAARQEILAVARDLELSEEGALSPPRDRAFFADIPVPRPSFCLSLPLF
LGRLPLSRLARPSLACLPRPRPPSLARPRAQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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