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Report for CCDS92680.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92680.1 Public Homo sapiens 19 ZNF677 24 110 108 CCDS HistoryNCBI Gene:342926Re-query CCDS DB by CCDS ID:92680.1Re-query CCDS DB by GeneID:342926See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92680.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599012.5 ENSP00000469701.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599012.5Link to Ensembl Protein Viewer:ENSP00000469701.1Re-query CCDS DB by Nucleotide ID:ENST00000599012Re-query CCDS DB by Protein ID:ENSP00000469701
Original member Current member NCBI NM_001385613.1 NP_001372542.1 Accepted alive Link to Nucleotide Sequence:NM_001385613.1Link to Protein Sequence:NP_001372542.1Re-query CCDS DB by Nucleotide ID:NM_001385613Re-query CCDS DB by Protein ID:NP_001372542Link to BLAST:NP_001372542.1
Original member Current member NCBI NM_001385614.1 NP_001372543.1 Accepted alive Link to Nucleotide Sequence:NM_001385614.1Link to Protein Sequence:NP_001372543.1Re-query CCDS DB by Nucleotide ID:NM_001385614Re-query CCDS DB by Protein ID:NP_001372543Link to BLAST:NP_001372543.1
Original member Current member NCBI NM_001385615.1 NP_001372544.1 Accepted alive Link to Nucleotide Sequence:NM_001385615.1Link to Protein Sequence:NP_001372544.1Re-query CCDS DB by Nucleotide ID:NM_001385615Re-query CCDS DB by Protein ID:NP_001372544Link to BLAST:NP_001372544.1

Chromosomal Locations for CCDS 92680.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53241801 53241865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53243744 53243897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53251536 53251550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (234 nt):
ATGGCTCTTTCTCAGGGACTGTTTACATTCAAGGATGTGGCCATAGAATTCTCTCAAGAGGAGTGGGAGT
GCCTGGACCCTGCCCAGAGGGCCTTGTACAGGGACGTGATGTTGGAGAACTACAGGAACCTGCTTTCTCT
CGATGAGGATAACATCCCTCCAGAAGATGGCGATGGACAACTTTTGGTGGACTCTCCCATGGAAGAGGTT
TCCTTGGTGACAGAACATTCTTGA

Translation (77 aa):
MALSQGLFTFKDVAIEFSQEEWECLDPAQRALYRDVMLENYRNLLSLDEDNIPPEDGDGQLLVDSPMEEV
SLVTEHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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