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Report for CCDS92771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92771.1 Public Homo sapiens 2 AFTPH 24 110 108 CCDS HistoryNCBI Gene:54812Re-query CCDS DB by CCDS ID:92771.1Re-query CCDS DB by GeneID:54812See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92771.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000695869.1 ENSP00000512233.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695869.1Link to Ensembl Protein Viewer:ENSP00000512233.1Re-query CCDS DB by Nucleotide ID:ENST00000695869Re-query CCDS DB by Protein ID:ENSP00000512233
Original member Current member NCBI NM_001375973.1 NP_001362902.1 Accepted alive Link to Nucleotide Sequence:NM_001375973.1Link to Protein Sequence:NP_001362902.1Re-query CCDS DB by Nucleotide ID:NM_001375973Re-query CCDS DB by Protein ID:NP_001362902Link to BLAST:NP_001362902.1

Chromosomal Locations for CCDS 92771.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 64551475 64553409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64572946 64573068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64579486 64579546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64581190 64581273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64585422 64585545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 64591885 64592035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGGAGCCAGACATCATTCGAATGTACTCTTCATCCCCACCACCATTAGACAATGGAGCAGAGGATGATG
ATGATGATGAATTTGGGGAATTTGGTGGGTTTTCAGAAGTTAGCCCTTCTGGTGTAGGGTTTGTTGATTT
CGATACACCAGATTATACTCGTCCCAAGGAAGAGTTTGTACCTTCAAACCATTTTATGCCAATTCATGAA
TTCTCAGAAAATGTAGATAGCCTTACAAGCTTTAAGTCCATTAAAAATGGTAATGATAAGGACATCACTG
CTGAACTTTCTGCTCCTGTGAAAGGACAGTCTGATGTTTTACTTTCTACCACCAGCAAAGAAATAATTTC
ATCTGAAATGTTAGCTACTTCCATTGATGGCATGGAAAGACCAGGAAATTTAAATAAAGTAGTGGAGCAG
AGACAGAATGTTGGAACACTTGAAAGTTTCTCTCCAGGAGATTTTAGAACTAATATGAATGTTGTTCATC
AAAACAAGCAGTTAGAGAGCTGCAATGGTGAAAAGCCTCCTTGTCTGGAGATTCTAACAAATGGGTTTGC
AGTGTTGGAAACTGTAAATCCTCAGGGAACAGATGATCTGGACAATGTAGCTGATTCAAAGGGACGGAAG
CCTCTTAGCACTCATAGCACTGAGTATAATTTAGACTCTGTACCTAGTCCTGCTGAGGAATTTGCAGATT
TTGCCACATTTTCCAAAAAGGAAAGGATACAATTAGAAGAAATAGAATGTGCAGTTTTAAATGATAGAGA
AGCACTAACCATTCGGGAAAACAATAAAATTAATAGAGTCAATGAACTGAATTCTGTAAAAGAAGTGGCT
TTGGGTAGAAGCTTGGATAACAAAGGAGACACTGATGGAGAGGATCAGGTTTGTGTTTCAGAAATAAGCA
TAGTGACTAACAGAGGTTTCAGTGTTGAAAAACAAGGCCTTCCAACACTGCAACAGGATGAATTTTTACA
GTCAGGTGTTCAGTCAAAGGCTTGGAGTTTGGTAGACTCAGCTGATAATTCAGAAGCCATTAGGAGAGAA
CAATGTAAAACTGAAGAAAAACTTGACTTACTTACTTCTAAATGTGCTCACCTATGCATGGATTCTGTTA
AAACTTCTGATGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAAAGTTTACTAATTTCCAAAGCCCAAA
CATTGACCCCACAGAAGAAAATGATTTGGATGATTCTTTAAGTGTAAAAAATGGTGATAGTAGTAATGAC
TTTGTGACTTGCAATGATATCAATGAAGATGATTTTGGTGATTTTGGTGACTTTGGCTCTGCCAGTGGCT
CAACTCCACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTTCAGAGCA
CTTTCCACATTTTAGTGAACCAGGTGATGACTTTGGAGAATTTGGGGATATAAATGCTGTTTCTTGCCAA
GAGGAGACAATATTAACAAAGTCAGACCTAAAACAGACTTCTGATAATTTATCAGAAGAATGTCAATTGG
CAAGAAAATCTAGTGGAACAGGCACTGAACCTGTTGCAAAACTTAAAAATGGGCAAGAAGGTGAGATTGG
ACATTTTGATTCTGTGCCAAATATTCAGGATGACTGCAATGGTTTTCAAGACTCTGATGATTTTGCAGAC
TTCAGTTCAGCTGGTCCTAGCCAAGTTGTAGATTGGAATGCTTTTGAGGATGAACAAAAAGATAGTTGTT
CTTGGGCTGCTTTTGGAGACCAGCAGGCTACTGAATCTCATCATCGAAAGGAAGCCTGGCAGTCACATAG
GACAGATGAAAATATTGATACTCCAGGAACCCCCAAAACGCACAGTGTACCTTCAGCAACTTCCAAAGGA
GCAGTTGCTAGTGGCCATTTACAGGAATCAGCCACTTCAGTTCAGGGTATGTTAGAGCCCACCAAGGAAC
CACTGAAACCACTTTCTGCTGCAGAAAAAATAGCTTCCATCGGTCAGACAGCCACCATGTCACCAGATAT
GAACACATGTACATCTGATCAGTTCCAGGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAGCAGTGGC
CTTACTAACCCTTTAGATGCTAGTGGAGGTTCCACTCTTCTGAACCTTGATTTCTTTGGGCCCGTGGATG
ACAGTAGCTCTAGCAGCAGCACCACAATCCCAGGTGTGGATCCGGAGTTGTATGAGTTAACAACTTCTAA
GCTGGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAG
ACAAGCACATCTACCAGTAGGAAACCGAAAAGAGAAGAGCACCTAAGTGAAGAAGCTATCAAGGTGATCG
CTGGCCTTCCTGACTTAACATTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCAC
AAGCTCTCAAGAAAAAGCAGACGGATAA

Translation (825 aa):
MEPDIIRMYSSSPPPLDNGAEDDDDDEFGEFGGFSEVSPSGVGFVDFDTPDYTRPKEEFVPSNHFMPIHE
FSENVDSLTSFKSIKNGNDKDITAELSAPVKGQSDVLLSTTSKEIISSEMLATSIDGMERPGNLNKVVEQ
RQNVGTLESFSPGDFRTNMNVVHQNKQLESCNGEKPPCLEILTNGFAVLETVNPQGTDDLDNVADSKGRK
PLSTHSTEYNLDSVPSPAEEFADFATFSKKERIQLEEIECAVLNDREALTIRENNKINRVNELNSVKEVA
LGRSLDNKGDTDGEDQVCVSEISIVTNRGFSVEKQGLPTLQQDEFLQSGVQSKAWSLVDSADNSEAIRRE
QCKTEEKLDLLTSKCAHLCMDSVKTSDDEVGSPKEESRKFTNFQSPNIDPTEENDLDDSLSVKNGDSSND
FVTCNDINEDDFGDFGDFGSASGSTPPFVTGTQDSMSDATFEESSEHFPHFSEPGDDFGEFGDINAVSCQ
EETILTKSDLKQTSDNLSEECQLARKSSGTGTEPVAKLKNGQEGEIGHFDSVPNIQDDCNGFQDSDDFAD
FSSAGPSQVVDWNAFEDEQKDSCSWAAFGDQQATESHHRKEAWQSHRTDENIDTPGTPKTHSVPSATSKG
AVASGHLQESATSVQGMLEPTKEPLKPLSAAEKIASIGQTATMSPDMNTCTSDQFQESLPPVQFDWSSSG
LTNPLDASGGSTLLNLDFFGPVDDSSSSSSTTIPGVDPELYELTTSKLEISTSSLKVTDAFARLMSTVEK
TSTSTSRKPKREEHLSEEAIKVIAGLPDLTFMHAKVLMFPATLTPSTSSQEKADG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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