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Report for CCDS92818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92818.1 Public Homo sapiens 2 LONRF2 24 110 108 CCDS HistoryNCBI Gene:164832Re-query CCDS DB by CCDS ID:92818.1Re-query CCDS DB by GeneID:164832See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409647.1 ENSP00000386823.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409647.1Link to Ensembl Protein Viewer:ENSP00000386823.1Re-query CCDS DB by Nucleotide ID:ENST00000409647Re-query CCDS DB by Protein ID:ENSP00000386823
Original member Current member NCBI NM_001371783.1 NP_001358712.1 Accepted alive Link to Nucleotide Sequence:NM_001371783.1Link to Protein Sequence:NP_001358712.1Re-query CCDS DB by Nucleotide ID:NM_001371783Re-query CCDS DB by Protein ID:NP_001358712Link to BLAST:NP_001358712.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358712.1 511 Q1L5Z9-2 511 100% 0 0

Chromosomal Locations for CCDS 92818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 100284298 100284492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100286914 100287063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100290258 100290420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100294229 100294387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100295432 100295553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100298836 100298950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100299226 100299319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100299717 100299918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100300644 100300787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100302921 100303043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 100309107 100309175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGAAGAACTATGAGCAAGCTCTCCAAGATGCCAGTGCAGCTTGTCAGAATGAACCTCTCTTGATTAAGG
GACATCAAGTAAAAGCTCAGGCTCTTTCTGGATTGGGAAGAAGTAAGGAAGTGTTAAAGGAATTTCTCTA
CTGCCTTGCTCTGAATCCTGAATGTAACTCTGTGAAGAAAGAAGCACAGAAGGTAATGTGTGAAGTGCTG
TTTTCAGCTACAGCAAATGTGCATGAAAATTTAACATCTTCCATCCAAAGCAGATTAAAGGCTCAGGGTC
ACAGCCACATGAATGCCCAGGCTCTGCTGGAAGAAGGTGATGCAGGGAGCTCGGAGAATTCATCTGAGAA
ATCTGATATGCTTGGAAATACCAATTCTTCAGTTTTGTATTTTATACTGGGTCTACACTTTGAAGAGGAT
AAAAAGGCGTTAGAAAGCATCCTTCCAACAGCACCCAGCGCTGGCTTAAAGAGACAGTTTCCGGATGACG
TGGAGGATGCACCTGACCTGAACGCCCCTGGAAAAATTCCCAAGAAAGATCTCTCACTTCAAAGGAGCCC
AAACTCTGAGACAGAAGAAAGTCAGGGGCTCTCGCTTGATGTAACTGACTTTGAGTGTGCCCTCTGCATG
AGATTGCTCTTTGAACCTGTCACTACGCCCTGTGGACACACATTTTGCCTAAAATGCCTTGAGCGCTGCC
TTGACCACGCCCCACACTGTCCTTTGTGCAAAGACAAACTTTCGGAATTATTGGCAAGCAGAAACTTTAA
CATAACTGTTCTGGCCGAAGAATTAATATTTCGATATTTGCCGGATGAATTGTCTGATAGGAAGAGAATT
TATGATGAAGAAATGTCAGAACTGTCAAATCTGACCAGAGACGTCCCCATCTTTGTGTGTGCCATGGCCT
TCCCCACGGTCCCATGTCCACTCCACGTTTTTGAGCCCCGCTATCGGCTTATGATAAGAAGATGCATGGA
AACTGGCACCAAGCGGTTTGGCATGTGTTTATCTGCTGAGCACGCGGGGCTTTCAGAGTATGGATGCATG
CTGGAGATTAAGGACGTGAGAACGTTTCCTGATGGAAGTTCTGTTGTAGACGCGATTGGCATCAGTCGGT
TCCGAGTGCTAAGCCACCGCCACAGAGATGGCTATAACACAGCGGACATTGAATATCTTGAAGATGAAAA
GGTGGAGGGTCCAGAGTATGAAGAACTTGCCGCTCTCCACGATTCTGTGCATCAACAGTCTGTTTCCTGG
TTCGCGTCTCTCCAGGATCGCATGAAAGAACAAATTTTAAGTCATTTTGGGGTAATGCCAGACAGAGAAC
CTGAGCCTCAGAGTAATCCCAGCGGCCCTGCCTGGTCCTGGTGGATCCTGGCCGTGCTGCCCCTGGAGCG
CAAGGCTCAGCTGGCCATCCTCGGCATGACCTCGCTCAAAGAGCGGCTCCTTGCCATCCGACGGATATTA
GTCATCATCACGCGTAAGATGAATAGTCGGCAAGAGCTGGCTAATGCCAGGGAGAGAAATAATTGA

Translation (511 aa):
MKNYEQALQDASAACQNEPLLIKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNSVKKEAQKVMCEVL
FSATANVHENLTSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEKSDMLGNTNSSVLYFILGLHFEED
KKALESILPTAPSAGLKRQFPDDVEDAPDLNAPGKIPKKDLSLQRSPNSETEESQGLSLDVTDFECALCM
RLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRI
YDEEMSELSNLTRDVPIFVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCM
LEIKDVRTFPDGSSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEGPEYEELAALHDSVHQQSVSW
FASLQDRMKEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGMTSLKERLLAIRRIL
VIITRKMNSRQELANARERNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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