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Report for CCDS9293.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9293.1 Public Homo sapiens 13 EEF1AKMT1 24 110 108 CCDS HistoryNCBI Gene:221143Re-query CCDS DB by CCDS ID:9293.1Re-query CCDS DB by GeneID:221143See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9293.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382754.4 ENSP00000372202.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382754.4Link to Ensembl Protein Viewer:ENSP00000372202.4Re-query CCDS DB by Nucleotide ID:ENST00000382754Re-query CCDS DB by Protein ID:ENSP00000372202
Original member Current member EBI ENST00000382758.6 ENSP00000372206.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382758.6Link to Ensembl Protein Viewer:ENSP00000372206.1Re-query CCDS DB by Nucleotide ID:ENST00000382758Re-query CCDS DB by Protein ID:ENSP00000372206
Original member Current member NCBI NM_001318939.2 NP_001305868.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001318939.2Link to Protein Sequence:NP_001305868.1Re-query CCDS DB by Nucleotide ID:NM_001318939Re-query CCDS DB by Protein ID:NP_001305868Link to BLAST:NP_001305868.1
Original member Current member NCBI NM_174928.3 NP_777588.1 Accepted alive Link to Nucleotide Sequence:NM_174928.3Link to Protein Sequence:NP_777588.1Re-query CCDS DB by Nucleotide ID:NM_174928Re-query CCDS DB by Protein ID:NP_777588Link to BLAST:NP_777588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305868.1 214 Q8WVE0 214 100% 0 0
NP_777588.1 214 Q8WVE0 214 100% 0 0

Chromosomal Locations for CCDS 9293.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 20729080 20729216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 20731841 20732121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 20737723 20737805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 20757455 20757598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (645 nt):
ATGAGTGATTTGGAAGATGATGAGACACCCCAGCTTTCTGCCCATGCCTTAGCAGCTCTCCAGGAATTTT
ATGCTGAGCAAAAGCAACAAATTGAGCCAGGCGAGGATGATAAATATAACATTGGAATAATAGAAGAGAA
TTGGCAACTGAGCCAGTTTTGGTATAGTCAGGAAACTGCTCTGCAGCTGGCACAGGAGGCAATTGCAGCT
GTAGGAGAAGGTGGCAGAATCGCATGTGTGAGTGCCCCTAGTGTTTACCAGAAACTCAGAGAGCTGTGCA
GAGAAAACTTTTCGATATACATCTTTGAATATGACAAAAGATTTGCCATGTATGGAGAGGAGTTTATTTT
CTATGATTACAATAATCCATTGGACTTACCCGAAAGAATTGCTGCACATAGTTTTGACATCGTAATAGCA
GATCCTCCCTATCTTTCGGAGGAATGTCTCAGAAAAACATCGGAAACCGTCAAGTACCTGACGCGGGGCA
AGATTCTGCTGTGCACAGGTGCCATCATGGAAGAACAGGCAGCAGAACTCCTTGGAGTGAAGATGTGCAC
GTTTGTTCCAAGACACACCCGGAACTTGGCAAATGAGTTTCGCTGTTATGTGAATTATGATTCTGGGCTG
GACTGTGGGATCTGA

Translation (214 aa):
MSDLEDDETPQLSAHALAALQEFYAEQKQQIEPGEDDKYNIGIIEENWQLSQFWYSQETALQLAQEAIAA
VGEGGRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDYNNPLDLPERIAAHSFDIVIA
DPPYLSEECLRKTSETVKYLTRGKILLCTGAIMEEQAAELLGVKMCTFVPRHTRNLANEFRCYVNYDSGL
DCGI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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