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Report for CCDS93156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93156.1 Public Homo sapiens 22 MB 24 110 108 CCDS HistoryNCBI Gene:4151Re-query CCDS DB by CCDS ID:93156.1Re-query CCDS DB by GeneID:4151See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401702.5 ENSP00000386060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401702.5Link to Ensembl Protein Viewer:ENSP00000386060.1Re-query CCDS DB by Nucleotide ID:ENST00000401702Re-query CCDS DB by Protein ID:ENSP00000386060
Original member Current member NCBI NM_001382812.1 NP_001369741.1 Accepted alive Link to Nucleotide Sequence:NM_001382812.1Link to Protein Sequence:NP_001369741.1Re-query CCDS DB by Nucleotide ID:NM_001382812Re-query CCDS DB by Protein ID:NP_001369741Link to BLAST:NP_001369741.1
Original member Current member NCBI NM_001382813.1 NP_001369742.1 Accepted alive Link to Nucleotide Sequence:NM_001382813.1Link to Protein Sequence:NP_001369742.1Re-query CCDS DB by Nucleotide ID:NM_001382813Re-query CCDS DB by Protein ID:NP_001369742Link to BLAST:NP_001369742.1

Chromosomal Locations for CCDS 93156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 35607297 35607443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 35610884 35611036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (300 nt):
ATGAAGGCGTCTGAGGACTTAAAGAAGCATGGTGCCACCGTGCTCACCGCCCTGGGTGGCATCCTTAAGA
AGAAGGGGCATCATGAGGCAGAGATTAAGCCCCTGGCACAGTCGCATGCCACCAAGCACAAGATCCCCGT
GAAGTACCTGGAGTTCATCTCGGAATGCATCATCCAGGTTCTGCAGAGCAAGCATCCCGGGGACTTTGGT
GCTGATGCCCAGGGGGCCATGAACAAGGCCCTGGAGCTGTTCCGGAAGGACATGGCCTCCAACTACAAGG
AGCTGGGCTTCCAGGGCTAG

Translation (99 aa):
MKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFG
ADAQGAMNKALELFRKDMASNYKELGFQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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