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Report for CCDS93200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93200.1 Public Homo sapiens 3 TTLL3 24 110 108 CCDS HistoryNCBI Gene:26140Re-query CCDS DB by CCDS ID:93200.1Re-query CCDS DB by GeneID:26140See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93200.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426895.10 ENSP00000392549.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426895.10Link to Ensembl Protein Viewer:ENSP00000392549.5Re-query CCDS DB by Nucleotide ID:ENST00000426895Re-query CCDS DB by Protein ID:ENSP00000392549
Original member Current member NCBI NM_001366051.2 NP_001352980.1 Accepted alive Link to Nucleotide Sequence:NM_001366051.2Link to Protein Sequence:NP_001352980.1Re-query CCDS DB by Nucleotide ID:NM_001366051Re-query CCDS DB by Protein ID:NP_001352980Link to BLAST:NP_001352980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352980.1 772 Q9Y4R7-1 772 100% 0 0

Chromosomal Locations for CCDS 93200.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 9810662 9810709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9812943 9813111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9813248 9813345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9817645 9817759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9818822 9818920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9820546 9820741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9825800 9825948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9826997 9827240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9828960 9829395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9833104 9833245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9834681 9834907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9835094 9835489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2319 nt):
ATGAACCGGCTCAGAAACGCCAAAATCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCTTTACAATCC
AAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCG
CTCAGGCCCCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGTGACACCACT
GAGGATGAGGATGAAGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTCGATGATTTACTGA
AATTTGATGACCTAGATGGAACACATGCTCTGATGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTG
GTTTGATGAGGTTGATGCCAACTCCTTCTTCCCACGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAA
GCCTTCATAGAGGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGA
AGTCATACCCTATTCAGGCAGTAGAGGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACAGGAGAAAAA
CCCAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTG
GCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCC
TCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTG
TGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGG
ATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATGCTGA
AGCTGGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCC
CCTCCTCATCTTTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTACC
GTGTGGTTCTACCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACT
CAGTGCACCTGTGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCC
GCCAGACAACATGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGG
TCCACCATCATCGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGC
AGTGTCGGAAGGCCAGCTTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCT
GATTGAGATCAACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTG
CAAGCTGACACCCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGC
TCATCTATAAGCAGCCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCAC
CATCAAGAAGCCCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAG
CGAGGCTCTGGGGAAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCATG
TACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGAC
CACAGGCAAGGCCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTC
AAGGTGGCACCCAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTGCCTCCGAGGCCCCCAGCTGG
AAGTGCCTTGTTGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAA
GGCAAATTCAAGGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCCCCCTG
AAACCCCTGCCCCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCCCC
TGCTTCGATTCCCCACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGAAACAAGTGAAGTATTTGGG
GCTTGACTCCATTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCA
AGAGCCTGA

Translation (772 aa):
MNRLRNAKIYVERAVKQKKIFTIQGCYPVIRCLLRRRGWVEKKMVHRSGPTLLPPQKDLDSSAMGDSDTT
EDEDEDEDEEFQPSQLFDFDDLLKFDDLDGTHALMVGLCLNLRNLPWFDEVDANSFFPRCYCLGAEDDKK
AFIEDFWLTAARNVLKLVVKSEWKSYPIQAVEEEASGDKQPKKQEKNPVLVSPEFVDEALCACEEYLSNL
AHMDIDKDLEAPLYLTPEGWSLFLQRYYQVVHEGAELRHLDTQVQRCEDILQQLQAVVPQIDMEGDRNIW
IVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLT
VWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHRHPLLPPDNMWSSQRFQAHLQEMGAPNAW
STIIVPGMKDAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGV
QADTLRVVIDRMLDRNCDTGAFELIYKQPAVEVPQYVGIRLLVEGFTIKKPMAMCHRRMGVRPAVPLLTQ
RGSGEARHHFPSLHTKAQLPSPHVLRHQGQVLRRQHSKLVGTKALSTTGKALRTLPTAKVFISLPPNLDF
KVAPSILKPRKAPALLCLRGPQLEVPCCLCPLKSEQFLAPVGRSRPKANSRPDCDKPRAEACPMKRLSPL
KPLPLVGTFQRRRGLGDMKLGKPLLRFPTALVLDPTPNKKKQVKYLGLDSIAVGGSRVDGARPCTPGSTA
RA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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