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Report for CCDS93290.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93290.1 Public Homo sapiens 3 ACTR8 24 110 108 CCDS HistoryNCBI Gene:93973Re-query CCDS DB by CCDS ID:93290.1Re-query CCDS DB by GeneID:93973See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93290.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000482349.5 ENSP00000419429.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000482349.5Link to Ensembl Protein Viewer:ENSP00000419429.1Re-query CCDS DB by Nucleotide ID:ENST00000482349Re-query CCDS DB by Protein ID:ENSP00000419429
Current member NCBI NM_001410774.1 NP_001397703.1 Accepted alive Link to Nucleotide Sequence:NM_001410774.1Link to Protein Sequence:NP_001397703.1Re-query CCDS DB by Nucleotide ID:NM_001410774Re-query CCDS DB by Protein ID:NP_001397703Link to BLAST:NP_001397703.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397703.1 513 Q9H981-2 513 100% 0 0

Chromosomal Locations for CCDS 93290.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 53868719 53868862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53869982 53870145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53871232 53871496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53872384 53872524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53873032 53873127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53874211 53874364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53875948 53876080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53876620 53876713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53877214 53877387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53877647 53877751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53878357 53878428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1542 nt):
ATGGTGGATCAAGCAATATGGTCTAAAAAGATGTCCAATGGTACAAGACGCATTCCTGTGTCCCCTGAAC
AGGCACGCTCCTACAATAAGCAGATGCGACCTGCAATTTTAGATCACTGTTCGGGAAATAAGTGGACAAA
CACATCTCATCACCCTGAGTATTTAGTAGGAGAAGAGGCCTTGTATGTTAATCCACTGGACTGTTACAAT
ATTCACTGGCCTATCAGAAGAGGTCAGTTAAATATTCACCCAGGCCCTGGGGGCTCTCTTACAGCTGTTC
TGGCAGATATTGAAGTAATATGGTCTCATGCGATACAAAAATACTTGGAAATCCCACTGAAAGATTTAAA
GTATTATAGATGTATCTTGTTAATTCCTGATATCTATAATAAGCAGCATGTGAAAGAACTAGTGAATATG
ATACTAATGAAGATGGGTTTTTCAGGGATTGTGGTCCATCAGGAGTCTGTGTGTGCCACCTATGGAAGTG
GCTTAAGCAGCACGTGTATTGTAGACGTTGGGGACCAGAAGACAAGTGTATGCTGTGTGGAGGATGGGGT
GTCTCATCGGAATACTCGGCTTTGTCTGGCATACGGAGGATCTGATGTGTCAAGATGTTTTTACTGGCTA
ATGCAGCGAGCTGGGTTCCCTTACAGAGAATGCCAGTTAACAAATAAAATGGATTGTCTTCTTCTGCAAC
ACCTTAAAGAAACTTTTTGTCATTTAGATCAGGACATCTCTGGGCTTCAGGACCATGAGTTTCAGATTCG
ACATCCTGATTCTCCTGCCCTGCTTTACCAGTTTCGATTAGGAGATGAAAAACTGCAGGCTCCAATGGCT
TTGTTTTACCCCGCAACTTTTGGAATCGTTGGACAGAAAATGACGACTTTGCAGCACAGATCTCAGGGCG
ATCCTGAGGATCCTCACGATGAACATTACCTGCTGGCCACACAGAGCAAACAAGAACAGTCTGCAAAAGC
TACTGCTGACCGAAAGTCTGCATCCAAACCTATTGGATTTGAAGGGGATCTTCGTGGCCAGTCCTCTGAT
CTTCCAGAAAGACTCCATTCCCAGGAGGTAGATTTGGGGTCTGCACAGGGAGATGGCCTGATGGCCGGCA
ACGATTCCGAGGAGGCCCTCACTGCACTGATGTCCAGGAAGACTGCCATCTCGCTGTTTGAAGGAAAAGC
CCTGGGCCTGGATAAAGCCATCCTCCATAGCATAGACTGCTGTTCATCTGACGACACCAAAAAGAAGATG
TACAGCTCCATCCTAGTGGTGGGAGGTGGTTTGATGTTTCATAAAGCTCAAGAATTTCTGCAGCACAGAA
TTCTCAACAAAATGCCACCATCCTTCAGGCGAATTATTGAAAATGTGGATGTGATCACAAGGCCTAAGGA
CATGGACCCCCGGCTGATTGCATGGAAAGGAGGGGCAGTGTTGGCTTGTTTGGATACAACACAGGAACTG
TGGATTTATCAGCGAGAGTGGCAGCGCTTTGGTGTCCGCATGTTACGAGAGCGGGCTGCGTTTGTGTGGT
GA

Translation (513 aa):
MVDQAIWSKKMSNGTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYN
IHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNM
ILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWL
MQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMA
LFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSD
LPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKM
YSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQEL
WIYQREWQRFGVRMLRERAAFVW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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