NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS93335.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93335.1 Public Homo sapiens 3 CEP97 24 110 108 CCDS HistoryNCBI Gene:79598Re-query CCDS DB by CCDS ID:93335.1Re-query CCDS DB by GeneID:79598See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93335.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000704366.1 ENSP00000515874.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704366.1Link to Ensembl Protein Viewer:ENSP00000515874.1Re-query CCDS DB by Nucleotide ID:ENST00000704366Re-query CCDS DB by Protein ID:ENSP00000515874
Current member NCBI NM_001410784.1 NP_001397713.1 Accepted alive Link to Nucleotide Sequence:NM_001410784.1Link to Protein Sequence:NP_001397713.1Re-query CCDS DB by Nucleotide ID:NM_001410784Re-query CCDS DB by Protein ID:NP_001397713Link to BLAST:NP_001397713.1

Chromosomal Locations for CCDS 93335.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101724677 101724719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101726594 101726736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101727383 101727541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101731840 101731953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101732488 101732654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101755430 101755594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757063 101757196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101757634 101758423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101762485 101762560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101764847 101765551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2496 nt):
ATGGCGGTGGCGCGCGTGGACGCGGCTTTGCCTCCCGGAGAAGGATCAGTGGTCAATTGGTCAGGACAGG
GACTACAGAAATTAGGTCCAAATTTACCCTGTGAAGCTGATATTCACACTTTGATTCTGGATAAAAATCA
GATTATTAAATTGGAAAATCTGGAGAAATGCAAACGATTAATACAGTTATCAGTAGCTAATAATCGGCTG
GTTCGGATGATGGGTGTGGCCAAGCTGACGTTGCTTCGTGTATTAAATTTGCCTCATAATAGCATTGGCT
GTGTGGAAGGGCTAAAGGAACTAGTACATCTGGAATGGCTGAATTTGGCAGGAAATAATCTTAAGACCCT
GCTTTTACATGGAAACATCATCACCTCTCTTAGAATGGCACCTGCTTACCTACCCAGAAGTCTTGCTATA
CTTTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGAGATCTCTTTTTTGGCATCCTTAACTGAATTGG
AACAGTTGTCGATTATGAACAATCCTTGTGTGATGGCAACACCATCCATCCCAGGATTTGACTATCGGCC
GTACATCGTCAGCTGGTGCCTAAACCTCAGAGTCCTAGATGGATATGTGATTTCTCAGAAGGAAAGTTTG
AAAGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGAGCATATCGGCCTGGCCAGCACATCCAGCTTGTCC
AATATCTGGCTACAGTCTGCCCCCTCACTTCTACACTAGGTCTTCAAACTGCAGAGGATGCCAAACTAGA
GAAGATTTTGAGCAAACAGAGGTTTCACCAGAGGCAGTTGATGAACCAAAGCCAAAATGAAGAGTTGTCT
CCTCTTGTTCCTGTTGAAACAAGGGCATCCCTTATTCCTGAGCATTCAAGCCCTGTTCAAGATTGCCAGA
TATCCCAGGAAAGTGAACCCGTCATTCAAGTGAATTCTTGGGTTGGGATAAACAGTAATGATGATCAGTT
ATTTGCGGTTAAGAATAATTTTCCAGCCTCTGTACACACTACGAGATATTCTCGAAATGATCTGCACCTG
GAAGACATACAGACGGATGAGGACAAGTTAAACTGTAGTCTTCTCTCTTCAGAGTCTACTTTTATGCCAG
TTGCATCAGGACTGTCTCCACTATCACCTACAGTTGAGCTGAGGCTGCAGGGCATTAACTTGGGCCTAGA
AGATGATGGTGTTGCAGATGAATCTGTGAAAGGGCTGGAAAGCCAGGTGTTGGATAAGGAAGAGGAACAG
CCTTTATGGGCTGCAAATGAGAATTCTGTTCAAATGATGAGAAGTGAAATCAATACAGAGGTAAATGAGA
AAGCTGGACTATTACCTTGTCCTGAGCCAACAATAATCAGTGCTATCTTGAAGGATGATAACCACAGTCT
TACATTTTTTCCTGAGTCAACTGAGCAGAAACAATCAGACATAAAGAAACCAGAAAATACACAACCAGAA
AATAAAGAAACCATATCTCAAGCAACTTCAGAGAAACTTCCCATGATTTTAACCCAGAGATCTGTTGCTT
TGGGACAAGACAAAGTTGCCCTTCAGAAATTAAATGATGCAGCCACCAAGCTTCAGGCCTGTTGGCGGGG
ATTTTATGCCAGGAACTACAACCCTCAAGCCAAAGATGTGCGTTACGAAATCCGGCTACGCAGAATGCAA
GAGCACATTGTCTGCTTAACTGATGAAATAAGGAGATTACGAAAAGAAAGAGATGAAGAACGTATTAAAA
AATTTGTACAAGAAGAAGCTTTCAGATTCCTTTGGAACCAGGTAAGGTCTCTACAGGTTTGGCAACAGAC
AGTGGACCAGCGTCTAAGTTCCTGGCATACTGATGTTCCTCCTATATCAAGTACTCTTGTGCCATCGAAA
CATCCATTATTTACCCAAAGCCAGGAGTCCTCTTGTGATCAAAATGCTGATTGGTTTATTGCTTCTGATG
TAGCTCCTCAAGAGAAATCATTACCAGAATTTCCAGACTCTGGTTTTCATTCCTCTCTAACAGAACAAGT
TCATTCATTGCAGCATTCTTTGGATTTTGAGAAAAGTTCCACAGAAGGCAGTGAAAGCTCCATAATGGGG
AATTCCATTGACACAGTCAGATATGGCAAAGAATCAGATTTAGGGGATGTTAGTGAAGAACATGGTGAAT
GGAATAAGGAAAGCTCAAATAACGAGCAGGACAATAGTCTGCTTGAACAGTATTTAACTTCAGTTCAACA
GCTGGAAGATGCTGATGAGAGGACCAATTTTGATACAGAGACAAGAGATAGCAAACTTCACATTGCTTGT
TTCCCAGTACAGTTAGATACATTGTCTGACGGTGCTTCTGTAGATGAGAGTCATGGCATATCTCCTCCTT
TGCAAGGTGAAATTAGCCAGACACAAGAGAATTCTAAATTAAATGCAGAAGTTCAGGGGCAGCAGCCAGA
ATGTGATTCTACATTTCAGCTATTGCATGTTGGTGTTACTGTGTAG

Translation (831 aa):
MAVARVDAALPPGEGSVVNWSGQGLQKLGPNLPCEADIHTLILDKNQIIKLENLEKCKRLIQLSVANNRL
VRMMGVAKLTLLRVLNLPHNSIGCVEGLKELVHLEWLNLAGNNLKTLLLHGNIITSLRMAPAYLPRSLAI
LSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESL
KAEWLYSQGKGRAYRPGQHIQLVQYLATVCPLTSTLGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELS
PLVPVETRASLIPEHSSPVQDCQISQESEPVIQVNSWVGINSNDDQLFAVKNNFPASVHTTRYSRNDLHL
EDIQTDEDKLNCSLLSSESTFMPVASGLSPLSPTVELRLQGINLGLEDDGVADESVKGLESQVLDKEEEQ
PLWAANENSVQMMRSEINTEVNEKAGLLPCPEPTIISAILKDDNHSLTFFPESTEQKQSDIKKPENTQPE
NKETISQATSEKLPMILTQRSVALGQDKVALQKLNDAATKLQACWRGFYARNYNPQAKDVRYEIRLRRMQ
EHIVCLTDEIRRLRKERDEERIKKFVQEEAFRFLWNQVRSLQVWQQTVDQRLSSWHTDVPPISSTLVPSK
HPLFTQSQESSCDQNADWFIASDVAPQEKSLPEFPDSGFHSSLTEQVHSLQHSLDFEKSSTEGSESSIMG
NSIDTVRYGKESDLGDVSEEHGEWNKESSNNEQDNSLLEQYLTSVQQLEDADERTNFDTETRDSKLHIAC
FPVQLDTLSDGASVDESHGISPPLQGEISQTQENSKLNAEVQGQQPECDSTFQLLHVGVTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH