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Report for CCDS93382.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93382.1 Public Homo sapiens 3 TMCC1 24 110 108 CCDS HistoryNCBI Gene:23023Re-query CCDS DB by CCDS ID:93382.1Re-query CCDS DB by GeneID:23023See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93382.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000698214.1 ENSP00000513608.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698214.1Link to Ensembl Protein Viewer:ENSP00000513608.1Re-query CCDS DB by Nucleotide ID:ENST00000698214Re-query CCDS DB by Protein ID:ENSP00000513608
Original member Current member NCBI NM_001349274.2 NP_001336203.1 Accepted alive Link to Nucleotide Sequence:NM_001349274.2Link to Protein Sequence:NP_001336203.1Re-query CCDS DB by Nucleotide ID:NM_001349274Re-query CCDS DB by Protein ID:NP_001336203Link to BLAST:NP_001336203.1

Chromosomal Locations for CCDS 93382.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 129651481 129651795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129654968 129655103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129670330 129671264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 129723964 129723990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGGAGCCCTCACTCTCCTCGGAAACCATCGAACGGTTGGAAGTAAGCAGCCTTGCCCAAACATCCAGTG
CAGTGGCCTCCAGTACCGATGGCAGCATCCACACAGACTCTGTGGATGGAACACCAGACCCTCAGCGCAC
AAAGGCTGCCATTGCTCACCTGCAGCAGAAGATCCTGAAGCTCACAGAACAAATCAAGATTGCACAAACA
GCCCGGGACGACAACGTTGCTGAATACTTGAAGCTTGCCAACAGTGCAGACAAACAGCAGGCTGCCCGCA
TCAAGCAAGTCTTTGAGAAGAAGAACCAGAAATCTGCCCAAACTATCCTCCAGCTGCAAAAGAAACTTGA
GCACTACCACAGGAAGCTCAGAGAGGTAGAGCAGAATGGGATCCCCCGGCAGCCAAAGGATGTCTTCAGG
GACATGCACCAGGGTCTGAAGGATGTAGGAGCAAAGGTGACTGGCTTCAGTGAAGGTGTGGTGGATAGTG
TCAAAGGTGGGTTTTCCAGCTTCTCCCAGGCCACCCATTCAGCAGCAGGCGCTGTAGTCTCAAAGCCCAG
AGAGATTGCCTCACTCATTCGGAACAAATTTGGCAGTGCAGACAACATCCCCAACCTGAAGGACTCTTTA
GAGGAAGGGCAAGTGGATGATGCGGGGAAGGCTTTGGGAGTGATTTCAAACTTTCAGTCTAGCCCAAAAT
ATGGTAGTGAAGAAGATTGTTCTAGTGCCACTTCAGGCTCAGTGGGAGCCAACAGCACCACAGGGGGCAT
CGCTGTAGGAGCATCCAGCTCCAAAACAAACACCCTGGACATGCAGAGCTCAGGATTTGATGCACTACTA
CATGAGATCCAGGAGATCCGGGAAACCCAGGCCAGACTAGAGGAATCCTTTGAGACTCTCAAGGAACATT
ATCAGAGGGACTATTCCTTAATAATGCAGACCTTACAGGAGGAGCGATATAGATGTGAACGATTGGAAGA
ACAGCTAAATGACCTAACAGAGCTCCACCAGAATGAAATCTTGAACTTGAAGCAGGAACTGGCAAGCATG
GAAGAAAAAATCGCGTATCAGTCCTATGAACGGGCCCGGGACATCCAGGAGGCCCTGGAGGCATGCCAGA
CGCGCATCTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGTGGTGCAGCTAGAAGGGCTGGAGAATGC
CACTGCCCGGAACCTTCTGGGCAAACTCATCAACATCCTCCTGGCTGTCATGGCAGTCCTTTTGGTCTTT
GTCTCCACTGTAGCCAACTGTGTGGTCCCCCTCATGAAGACTCGCAACAGGACGTTCAGCACTTTATTCC
TTGTGGTTTTTATTGCCTTTCTCTGGAAGCACTGGGACGCCCTCTTCAGCTATGTGGAACGGTTCTTTTC
ATCCCCTAGATGA

Translation (470 aa):
MEPSLSSETIERLEVSSLAQTSSAVASSTDGSIHTDSVDGTPDPQRTKAAIAHLQQKILKLTEQIKIAQT
ARDDNVAEYLKLANSADKQQAARIKQVFEKKNQKSAQTILQLQKKLEHYHRKLREVEQNGIPRQPKDVFR
DMHQGLKDVGAKVTGFSEGVVDSVKGGFSSFSQATHSAAGAVVSKPREIASLIRNKFGSADNIPNLKDSL
EEGQVDDAGKALGVISNFQSSPKYGSEEDCSSATSGSVGANSTTGGIAVGASSSKTNTLDMQSSGFDALL
HEIQEIRETQARLEESFETLKEHYQRDYSLIMQTLQEERYRCERLEEQLNDLTELHQNEILNLKQELASM
EEKIAYQSYERARDIQEALEACQTRISKMELQQQQQQVVQLEGLENATARNLLGKLINILLAVMAVLLVF
VSTVANCVVPLMKTRNRTFSTLFLVVFIAFLWKHWDALFSYVERFFSSPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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