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Report for CCDS93560.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93560.1 Public Homo sapiens 4 MMRN1 24 110 108 CCDS HistoryNCBI Gene:22915Re-query CCDS DB by CCDS ID:93560.1Re-query CCDS DB by GeneID:22915See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93560.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000508372.1 ENSP00000426461.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000508372.1Link to Ensembl Protein Viewer:ENSP00000426461.1Re-query CCDS DB by Nucleotide ID:ENST00000508372Re-query CCDS DB by Protein ID:ENSP00000426461
Current member NCBI NM_001410735.1 NP_001397664.1 Accepted alive Link to Nucleotide Sequence:NM_001410735.1Link to Protein Sequence:NP_001397664.1Re-query CCDS DB by Nucleotide ID:NM_001410735Re-query CCDS DB by Protein ID:NP_001397664Link to BLAST:NP_001397664.1

Chromosomal Locations for CCDS 93560.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 89911975 89912050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89923168 89923272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89927795 89927968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89934810 89936798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89951605 89951751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 89952997 89953418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2913 nt):
ATGCAACATAAAATTGTCACCTCATTGGATTGGAGGTGCTGTCCTGGATACAGTGGGCCGAAATGTCAAC
TAAGAGCCCAGGAACAGCAAAGTTTGATACACACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAGAGG
AGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAAAATGACTGATCAGGTG
AACTACCAGGCAATGAAACTGACTCTTCTGCAGAAGAAGATTGACAATATTTCTTTGACTGTGAATGATG
TAAGGAACACTTACTCCTCCCTAGAAGGAAAAGTCAGCGAAGATAAAAGCAGAGAATTTCAATCTCTTCT
AAAAGGTCTAAAATCCAAAAGCATTAATGTACTGATAAGAGACATAGTAAGAGAACAATTTAAAATTTTT
CAAAATGACATGCAAGAGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCTATCAGAGGACCTCGAAA
GCACCAGGCAAATAATTCAAAAAGTTAATGAATCTGTGGTTTCAATAGCAGCCCAGCAAAAGTTTGTTTT
GGTGCAAGAGAATCGGCCCACTTTGACTGATATAGTGGAACTAAGGAATCACATTGTGAATGTAAGGCAA
GAAATGACTCTTACATGTGAGAAGCCTATTAAAGAACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTC
TAGAACAGGAACACTCAAGAAGCATTCTGTATTATGAATCCCTCAATAAAACTCTTTCTAAATTGAAGGA
AGTACATGAGCAGCTTTTATCAACTGAACAGGTATCAGACCAGAAGAATGCTCCAGCTGCTGAGTCAGTT
AGCAATAATGTCACTGAGTACATGTCTACTTTACATGAAAATATAAAGAAGCAGAGTTTGATGATGCTGC
AAATGTTTGAAGATTTGCACATTCAAGAAAGCAAGATTAACAATCTCACCGTCTCTTTGGAGATGGAGAA
AGAGTCTCTCAGAGGTGAATGTGAAGACATGTTATCCAAATGCAGAAATGATTTTAAATTTCAACTTAAG
GACACAGAAGAGAATTTACATGTGTTAAATCAAACATTGGCTGAAGTTCTCTTTCCAATGGACAATAAGA
TGGACAAAATGAGTGAGCAACTAAATGATTTGACTTATGATATGGAGATCCTTCAACCCTTGCTTGAGCA
GGGAGCATCACTCAGACAGACAATGACATATGAACAACCAAAGGAAGCAATAGTGATAAGGAAAAAGATA
GAAAATCTGACTAGTGCTGTCAATAGTCTAAATTTTATTATCAAAGAACTTACAAAAAGACACAACTTAC
TTAGAAATGAAGTACAGGGTCGTGATGATGCCTTAGAAAGACGTATCAATGAATATGCCTTAGAAATGGA
AGATGGCCTCAATAAGACAATGACTATTATAAATAATGCTATTGATTTCATTCAAGATAACTATGCCCTA
AAAGAGACTTTAAGTACTATTAAGGATAATAGTGAGATCCATCATAAATGTACCTCCGATATGGAAACTA
TTTTGACATTTATTCCTCAGTTCCACCGTCTGAATGATTCTATTCAGACTTTGGTCAATGACAATCAGAG
ATATAACTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTATTCCCAGAGATGAGAAACTAAATCAGTCC
AACTTCCAAAAGATGTATCAAATGTTCAATGAAACCACTTCCCAAGTGAGAAAATACCAGCAAAATATGA
GTCATTTGGAAGAAAAACTACTCTTAACTACCAAGATTTCCAAAAATTTTGAGACTCGGTTGCAAGACAT
TGAGTCTAAAGTTACCCAGACGCTCATACCTTATTATATTTCAGTTAAAAAAGGCAGTGTAGTTACAAAT
GAGAGAGATCAGGCTCTTCAACTGCAAGTATTAAATTCCAGATTTAAGGCGTTGGAAGCAAAATCTATCC
ATCTTTCAATTAACTTCTTTTCGCTTAACAAAACTCTCCACGAAGTTTTAACAATGTGTCACAATGCTTC
TACAAGTGTGTCAGAACTGAATGCTACCATCCCTAAGTGGATAAAACATTCCCTGCCAGATATTCAACTT
CTTCAGAAAGGTCTAACAGAATTTGTGGAACCAATAATTCAAATAAAAACTCAAGCTGCCCTATCTAATT
TAACTTGTTGTATAGATCGATCGTTGCCTGGTAGTCTGGCAAATGTTGTCAAGTCTCAGAAGCAAGTAAA
ATCATTGCCAAAGAAAATTAACGCACTTAAGAAACCAACGGTAAATCTTACCACAGTCCTGATAGGCCGG
ACTCAAAGAAACACGGACAACATAATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAA
ATGGGGGCACGTGCATAAATGGAAGAACTAGCTTTACCTGTGCCTGCAGACATCCTTTTACTGGTGACAA
CTGCACTATCAAGCTTGTGGAAGAAAATGCTTTAGCTCCAGATTTTTCCAAAGGATCTTACAGATATGCA
CCCATGGTGGCATTTTTTGCATCTCATACGTATGGAATGACTATACCTGGTCCTATCCTGTTTAATAACT
TGGATGTCAATTATGGAGCTTCATATACCCCAAGAACTGGAAAATTTAGAATTCCGTATCTTGGAGTATA
TGTTTTCAAGTACACCATCGAGTCATTTAGTGCTCATATTTCTGGATTTTTAGTGGTTGATGGAATAGAC
AAGCTTGCATTTGAGTCTGAAAATATTAACAGTGAAATACACTGTGATAGGGTTTTAACTGGGGATGCCT
TATTAGAATTAAATTATGGGCAGGAAGTCTGGTTACGACTTGCAAAAGGAACAATTCCAGCCAAGTTTCC
CCCTGTTACTACATTTAGTGGCTATTTATTATATCGTACATAA

Translation (970 aa):
MQHKIVTSLDWRCCPGYSGPKCQLRAQEQQSLIHTNQAESHTAVGRGVAEQQQQQGCGDPEVMQKMTDQV
NYQAMKLTLLQKKIDNISLTVNDVRNTYSSLEGKVSEDKSREFQSLLKGLKSKSINVLIRDIVREQFKIF
QNDMQETVAQLFKTVSSLSEDLESTRQIIQKVNESVVSIAAQQKFVLVQENRPTLTDIVELRNHIVNVRQ
EMTLTCEKPIKELEVKQTHLEGALEQEHSRSILYYESLNKTLSKLKEVHEQLLSTEQVSDQKNAPAAESV
SNNVTEYMSTLHENIKKQSLMMLQMFEDLHIQESKINNLTVSLEMEKESLRGECEDMLSKCRNDFKFQLK
DTEENLHVLNQTLAEVLFPMDNKMDKMSEQLNDLTYDMEILQPLLEQGASLRQTMTYEQPKEAIVIRKKI
ENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEYALEMEDGLNKTMTIINNAIDFIQDNYAL
KETLSTIKDNSEIHHKCTSDMETILTFIPQFHRLNDSIQTLVNDNQRYNFVLQVAKTLAGIPRDEKLNQS
NFQKMYQMFNETTSQVRKYQQNMSHLEEKLLLTTKISKNFETRLQDIESKVTQTLIPYYISVKKGSVVTN
ERDQALQLQVLNSRFKALEAKSIHLSINFFSLNKTLHEVLTMCHNASTSVSELNATIPKWIKHSLPDIQL
LQKGLTEFVEPIIQIKTQAALSNLTCCIDRSLPGSLANVVKSQKQVKSLPKKINALKKPTVNLTTVLIGR
TQRNTDNIIYPEEYSSCSRHPCQNGGTCINGRTSFTCACRHPFTGDNCTIKLVEENALAPDFSKGSYRYA
PMVAFFASHTYGMTIPGPILFNNLDVNYGASYTPRTGKFRIPYLGVYVFKYTIESFSAHISGFLVVDGID
KLAFESENINSEIHCDRVLTGDALLELNYGQEVWLRLAKGTIPAKFPPVTTFSGYLLYRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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