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Report for CCDS93657.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
93657.1 |
Public |
Homo sapiens |
4 |
TRIM2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23321](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:93657.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23321](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 93657.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000675710.1 |
ENSP00000501997.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000675710.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000501997.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000675710](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000501997](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000676335.1 |
ENSP00000502243.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000676335.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000502243.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000676335](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000502243](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000675782.1 |
ENSP00000502776.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000675782.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000502776.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000675782](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000502776](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375522.1 |
NP_001362451.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375522.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362451.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375522](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362451](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362451.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375523.1 |
NP_001362452.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375523.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362452.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375523](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362452](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362452.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375525.1 |
NP_001362454.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375525.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362454.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375525](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362454](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362454.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 93657.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1977 nt): ATGGACGTGCTGCAGCGAACTCCAGGCAGCAACGCTGAGGAGTCTTCCATCCTGGAGACAGTCACTGCTG TGGCTGCGGGAAAGCCTCTCTCTTGCCCAAACCACGATGGGAATGTGATGGAATTTTACTGCCAGTCCTG TGAGACTGCCATGTGTCGGGAGTGCACGGAGGGGGAGCACGCAGAGCACCCCACAGTTCCACTCAAGGAT GTGGTGGAACAGCACAAGGCCTCGCTCCAGGTCCAGCTGGATGCTGTCAACAAAAGGCTCCCAGAAATAG ATTCTGCTCTTCAGTTCATCTCTGAAATCATTCATCAGTTAACCAACCAAAAGGCCAGCATCGTGGATGA CATTCATTCCACCTTTGATGAGCTCCAGAAGACTTTAAATGTGCGCAAGAGTGTGCTGCTTATGGAATTG GAGGTCAACTATGGCCTCAAACACAAAGTCCTCCAGTCGCAGCTGGATACTCTGCTCCAGGGGCAGGAGA GCATTAAGAGCTGCAGCAACTTCACAGCGCAGGCCCTCAACCATGGCACGGAGACCGAGGTCCTACTGGT GAAGAAGCAGATGAGCGAGAAGCTGAACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCGCGGGAGAAC GACCAGCTGGATTTCATCGTGGAAACCGAGGGGCTGAAGAAGTCCATCCACAACCTCGGGACGATCTTAA CCACCAACGCCGTTGCCTCAGAGACAGTGGCCACGGGCGAGGGGCTGCGGCAGACCATCATCGGGCAGCC CATGTCCGTCACCATCACCACCAAGGACAAAGACGGTGAGCTGTGCAAAACCGGCAACGCCTACCTCACC GCCGAACTGAGCACCCCCGACGGGAGCGTGGCAGACGGGGAGATCCTGGACAACAAGAACGGCACCTATG AGTTTTTGTACACTGTCCAGAAGGAAGGGGACTTTACCCTGTCTCTGAGACTCTATGACCAGCACATCCG AGGCAGCCCGTTTAAGCTGAAAGTGATCCGATCCGCTGATGTGTCTCCCACCACAGAAGGCGTGAAGAGG CGCGTTAAGTCCCCGGGGAGCGGCCACGTCAAGCAGAAAGCTGTGAAAAGACCCGCAAGCATGTACAGCA CTGGAAAACGAAAAGAGAATCCCATCGAAGACGATTTGATCTTTCGAGTGGGTACCAAAGGAAGAAATAA AGGAGAGTTTACAAATCTTCAGGGGGTAGCTGCATCTACAAATGGAAAGATATTAATTGCAGACAGTAAC AACCAATGTGTGCAGATATTTTCCAATGATGGCCAGTTCAAAAGTCGTTTTGGCATACGGGGACGCTCTC CGGGGCAGCTGCAGCGGCCCACAGGAGTGGCTGTACATCCCAGTGGGGACATAATCATTGCCGATTATGA TAATAAATGGGTCAGCATTTTCTCCTCCGATGGGAAATTTAAGACAAAAATTGGATCAGGAAAGCTGATG GGACCCAAAGGAGTTTCTGTGGACCGCAATGGGCACATTATTGTTGTGGACAACAAGGCGTGCTGCGTGT TTATCTTCCAGCCAAACGGGAAAATAGTCACCAGGTTTGGTAGCCGAGGAAATGGGGACAGGCAGTTTGC AGGTCCCCATTTTGCAGCTGTAAATAGCAATAATGAGATTATTATTACAGATTTCCATAATCATTCTGTC AAGGTGTTTAATCAGGAAGGAGAATTCATGTTGAAGTTTGGCTCAAATGGAGAAGGAAATGGGCAGTTTA ATGCTCCAACAGGTGTAGCAGTGGATTCAAATGGAAACATCATTGTGGCCGACTGGGGAAACAGCAGGAT CCAGGTTTTTGATGGGAGTGGATCATTTTTGTCCTACATTAACACATCTGCTGACCCACTCTATGGCCCC CAAGGCCTGGCCCTAACTTCAGATGGTCATGTTGTGGTTGCAGACTCTGGAAATCACTGTTTCAAAGTCT ATCGATACTTACAGTAA
Translation (658 aa): MDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKD VVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMEL EVNYGLKHKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPREN DQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLT AELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKR RVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSN NQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLM GPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSV KVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGP QGLALTSDGHVVVADSGNHCFKVYRYLQ
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