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Report for CCDS9372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9372.1 Public Homo sapiens 13 MRPS31 24 110 108 CCDS HistoryNCBI Gene:10240Re-query CCDS DB by CCDS ID:9372.1Re-query CCDS DB by GeneID:10240See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9372.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323563.8 ENSP00000315397.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323563.8Link to Ensembl Protein Viewer:ENSP00000315397.6Re-query CCDS DB by Nucleotide ID:ENST00000323563Re-query CCDS DB by Protein ID:ENSP00000315397
Original member Current member NCBI NM_005830.4 NP_005821.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005830.4Link to Protein Sequence:NP_005821.2Re-query CCDS DB by Nucleotide ID:NM_005830Re-query CCDS DB by Protein ID:NP_005821Link to BLAST:NP_005821.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005821.2 395 Q92665 395 100% 0 0

Chromosomal Locations for CCDS 9372.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 40729372 40729601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40749138 40749281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40754019 40754092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40756873 40757013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40758948 40759106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40766746 40767033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 40770985 40771136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGTTTCCTAGAGTCTCGACGTTCCTACCTCTTCGCCCCCTTTCCCGCCACCCTTTGTCCTCTGGAAGCC
CGGAGACATCAGCGGCTGCGATTATGCTACTCACTGTTCGGCACGGAACAGTCAGGTACCGCAGTTCAGC
GCTGTTGGCCCGGACAAAAAATAACATCCAAAGATATTTTGGCACTAACAGTGTGATCTGTAGCAAGAAA
GATAAGCAGTCTGTTCGAACTGAGGAGACTTCCAAGGAGACTTCAGAGAGCCAAGACAGTGAAAAGGAAA
ATACGAAAAAAGACTTGTTAGGCATTATTAAGGGCATGAAAGTTGAATTAAGCACAGTAAATGTACGAAC
AACAAAGCCCCCCAAAAGAAGACCACTTAAAAGTTTGGAAGCTACACTTGGCAGGCTTCGAAGAGCTACA
GAATATGCTCCAAAGAAGAGAATTGAGCCCCTGAGTCCTGAGTTGGTGGCAGCTGCATCTGCTGTGGCAG
ATTCTCTCCCTTTTGATAAGCAAACAACCAAGTCAGAGCTGCTGAGCCAGCTCCAGCAGCATGAGGAAGA
GTCAAGGGCACAGAGAGATGCAAAGCGACCTAAAATTAGTTTCAGTAACATAATATCAGATATGAAAGTT
GCCAGATCTGCTACAGCTAGAGTTCGTTCAAGACCAGAGCTTCGGATTCAGTTTGATGAAGGCTATGACA
ATTATCCTGGCCAGGAGAAGACGGATGATCTTAAAAAAAGGAAAAATATATTCACAGGGAAAAGACTTAA
TATTTTTGACATGATGGCAGTTACTAAAGAAGCACCTGAAACAGACACATCACCTTCACTTTGGGATGTG
GAATTTGCTAAGCAGTTAGCCACAGTAAATGAACAACCCCTTCAGAATGGATTTGAAGAGCTGATCCAGT
GGACAAAAGAGGGGAAACTATGGGAGTTCCCAATTAACAATGAAGCAGGTTTTGATGATGATGGTTCAGA
ATTTCATGAACATATATTTCTGGAGAAACACCTGGAGAGCTTTCCAAAACAAGGACCAATTCGCCACTTC
ATGGAGCTGGTGACTTGTGGCCTTTCCAAAAACCCATATCTTAGTGTTAAACAGAAGGTTGAACACATAG
AGTGGTTTAGAAATTATTTTAATGAAAAAAAGGATATTCTAAAAGAAAGTAACATACAGTTCAATTAA

Translation (395 aa):
MFPRVSTFLPLRPLSRHPLSSGSPETSAAAIMLLTVRHGTVRYRSSALLARTKNNIQRYFGTNSVICSKK
DKQSVRTEETSKETSESQDSEKENTKKDLLGIIKGMKVELSTVNVRTTKPPKRRPLKSLEATLGRLRRAT
EYAPKKRIEPLSPELVAAASAVADSLPFDKQTTKSELLSQLQQHEEESRAQRDAKRPKISFSNIISDMKV
ARSATARVRSRPELRIQFDEGYDNYPGQEKTDDLKKRKNIFTGKRLNIFDMMAVTKEAPETDTSPSLWDV
EFAKQLATVNEQPLQNGFEELIQWTKEGKLWEFPINNEAGFDDDGSEFHEHIFLEKHLESFPKQGPIRHF
MELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKKDILKESNIQFN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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