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Report for CCDS93770.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93770.1 Public Homo sapiens 5 CEP120 24 110 108 CCDS HistoryNCBI Gene:153241Re-query CCDS DB by CCDS ID:93770.1Re-query CCDS DB by GeneID:153241See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93770.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000675330.1 ENSP00000502634.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675330.1Link to Ensembl Protein Viewer:ENSP00000502634.1Re-query CCDS DB by Nucleotide ID:ENST00000675330Re-query CCDS DB by Protein ID:ENSP00000502634
Original member Current member NCBI NM_001375406.1 NP_001362335.1 Accepted alive Link to Nucleotide Sequence:NM_001375406.1Link to Protein Sequence:NP_001362335.1Re-query CCDS DB by Nucleotide ID:NM_001375406Re-query CCDS DB by Protein ID:NP_001362335Link to BLAST:NP_001362335.1

Chromosomal Locations for CCDS 93770.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 123346519 123346753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123349944 123350089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123364496 123364594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123372650 123372772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123377374 123377535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123378336 123378428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123382111 123382200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123382737 123382889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123382986 123383082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123384951 123385133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123386518 123386667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123388432 123388606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123389924 123390005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123391110 123391337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123393300 123393497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123399136 123399284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123412399 123412540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123416010 123416124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123418359 123418515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 123422950 123422998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2826 nt):
ATGGTCTCCAAATCCGACCAATTGCTCATCGTCGTGTCCATCCTAGAAGGTCGGCATTTCCCCAAACGTC
CAAAGCATATGCTTGTAGTGGAAGCAAAGTTTGATGGAGAACAGTTGGCTACTGATCCTGTGGACCACAC
TGACCAGCCAGAATTTGCTACTGAGTTAGCTTGGGAAATTGACAGGAAAGCGCTTCATCAGCACAGGCTA
CAGCGTACTCCTATCAAACTCCAATGTTTTGCCTTGGATCCTGTAACTTCAGCCAAGGAAACCATAGGTT
ACATCGTTCTGGATTTAAGAACCGCTCAAGAAACAAAGCAGGCACCAAAATGGTACCAGTTGCTGAGTAA
TAAATACACCAAATTCAAGTCTGAGATACAGATAAGTATTGCTTTGGAAACCGATACAAAGCCACCAGTG
GATAGCTTTAAAGCAAAGGGGGCTCCCCCTCGAGATGGAAAAGTACCTGCCATCCTGGCTGGACTTGACC
CCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCAGAATACTGTAC
TGACTCCTTTATTATGTCAGTGACCATAGCATTTGCTACCCAGTTGGAACAGTTAATTCCATGTACCATG
AAACTTCCAGAAAGACAGCCTGAGTTTTTCTTTTACTACTCTTTACTGGGAAATGATGTTACAAATGAAC
CCTTCAATGATTTAATCAACCCAAACTTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAGA
AATTCTTCGTGTTTACCTGGCTCTTCAGTCTAAACTGCAGATTCACCTCTGCTGTGGAGACCAGTCACTT
GGAAGTACAGAAATACCTTTAACTGGATTACTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCA
CAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAGAAGCTTGCACCTATTCCTGTGGA
GCTAGCCCCAACTGTGGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGACTCCCAGTCACCTCCAACA
AAAGATGATGCAACAGAAAGTGAAGTGGAAAGTTTACAGTATGATAAGGACACCAAACCAAATCCAAAAG
CCAGTTCTTCTGTACCTGCTTCACTGGCCCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGCTTCAGG
ACAGAAGATTGCTGTACCAGCAACATCACATCATTTTTGCTTTTCAATAGACTTAAGGAGTATACATGCC
TTGGAGATTGGTTTTCCAATCAACTGTATATTAAGGTACTCATATCCATTCTTTGGAAGTGCAGCTCCTA
TTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATGGAAGTTTTTCTTCCCCAGTCTTACTGTGCATT
TGATTTTGCAACTATGCCTCATCAGCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGG
CACAAGGATAAAATGAGTAAAGATTTACTTCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTTGTCTT
CAGAAAAAACTCGTTTTTTAGGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCC
TGTTATAGCAGCACAAGGATCAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTAT
GGACTAGTAAAAATGCGTGAGATTTTTATCTCTGATTCATCTCAGGGTGTATCTGCCGTACAGCAAAAGC
CGTCTTCTCTTCCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
AGCAGCACTTGAGCTAGAAATGTGGAAGGAGATGCAAGAAGATATATTTGAAAATCAGCTGAAGCAGAAA
GAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGGACCGAGAAAGAGAATCACTAGTAA
AGAAAAAGGTGGCTGAATATACTATTCTAGAAGGAAAACTTCAAAAAACTCTAATTGACTTGGAGAAGCG
AGAGCAGCAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAAAAAAAGGAACTGCAATCAGAACGTCAG
CGGAACCTGCAAGAACTGCAGGACTCTATCCGTAGGGCCAAAGAGGACTGTATTCACCAAGTAGAACTAG
AAAGGTTAAAAATCAAACAGCTCGAAGAGGATAAACACCGCCTTCAGCAACAGCTTAATGATGCTGAAAA
TAAGTATAAGATTTTGGAAAAAGAGTTCCAACAGTTCAAGGACCAGCAAAACAACAAACCAGAAATCCGT
CTACAGTCTGAAATAAATCTTCTCACCTTGGAAAAGGTTGAACTTGAAAGAAAGTTGGAATCTGCAACTA
AGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGA
GCAAGAAAGTCAAATGGCTCGTCTTAAAAAACAGCAGGAAGAATTGGAACAGATGAGACTACGTTACCTT
GCCGCTGAGGAAAAAGATACAGTAAAAACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACA
GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAAAAAGGATGGCCC
CCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTG
ATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATTT
TGGCAAAAAGCAATGCCAGTAATTAA

Translation (941 aa):
MVSKSDQLLIVVSILEGRHFPKRPKHMLVVEAKFDGEQLATDPVDHTDQPEFATELAWEIDRKALHQHRL
QRTPIKLQCFALDPVTSAKETIGYIVLDLRTAQETKQAPKWYQLLSNKYTKFKSEIQISIALETDTKPPV
DSFKAKGAPPRDGKVPAILAGLDPRDIVAVLNEEGGYHQIGPAEYCTDSFIMSVTIAFATQLEQLIPCTM
KLPERQPEFFFYYSLLGNDVTNEPFNDLINPNFEPERASVRIRSSVEILRVYLALQSKLQIHLCCGDQSL
GSTEIPLTGLLKKGSTEINQHPVTVEGAFTLDPPNRAKQKLAPIPVELAPTVGVSVALQREGIDSQSPPT
KDDATESEVESLQYDKDTKPNPKASSSVPASLAQLVTTSNASEVASGQKIAVPATSHHFCFSIDLRSIHA
LEIGFPINCILRYSYPFFGSAAPIMTNPPVEVRKNMEVFLPQSYCAFDFATMPHQLQDTFLRIPLLVELW
HKDKMSKDLLLGIARIQLSNILSSEKTRFLGSNGEQCWRQTYSESVPVIAAQGSNNRIADLSYTVTLEDY
GLVKMREIFISDSSQGVSAVQQKPSSLPPAPCPSEIQTEPRETLEYKAALELEMWKEMQEDIFENQLKQK
ELAHMQALAEEWKKRDRERESLVKKKVAEYTILEGKLQKTLIDLEKREQQLASVESELQREKKELQSERQ
RNLQELQDSIRRAKEDCIHQVELERLKIKQLEEDKHRLQQQLNDAENKYKILEKEFQQFKDQQNNKPEIR
LQSEINLLTLEKVELERKLESATKSKLHYKQQWGRALKELARLKQREQESQMARLKKQQEELEQMRLRYL
AAEEKDTVKTERQELLDIRNELNRLRQQEQKQYQDSTEIASGKKDGPHGSVLEEGLDDYLTRLIEERDTL
MRTGVYNHEDRIISELDRQIREILAKSNASN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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