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Report for CCDS93811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93811.1 Public Homo sapiens 5 ATP10B 24 110 108 CCDS HistoryNCBI Gene:23120Re-query CCDS DB by CCDS ID:93811.1Re-query CCDS DB by GeneID:23120See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000642502.1 ENSP00000493802.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642502.1Link to Ensembl Protein Viewer:ENSP00000493802.1Re-query CCDS DB by Nucleotide ID:ENST00000642502Re-query CCDS DB by Protein ID:ENSP00000493802
Current member NCBI NM_001410822.1 NP_001397751.1 Accepted alive Link to Nucleotide Sequence:NM_001410822.1Link to Protein Sequence:NP_001397751.1Re-query CCDS DB by Nucleotide ID:NM_001410822Re-query CCDS DB by Protein ID:NP_001397751Link to BLAST:NP_001397751.1

Chromosomal Locations for CCDS 93811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 160565453 160565900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160569496 160569683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160589592 160589696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160591059 160591139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160598770 160598970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160602577 160602702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160603965 160604041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160606765 160607086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160612741 160612925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160615838 160615964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160617864 160617973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160620347 160620950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160622394 160622585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160632129 160632367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160634354 160634606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160636182 160636309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160640461 160640592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160644138 160644244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160649171 160649256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160670463 160670667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160684835 160685220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4302 nt):
ATGAAAAAGGAAGGGAGGAAAAGGTGGAAAAGAAAAGAAGACAAGAAGCGAGTAGTGGTCTCTAACTTGC
TCTTTGAAGGATGGTCTCACAAAGAGAACCCCAACAGACATCATCGTGGGAATCAAATCAAGACCAGCAA
GTACACCGTGTTGTCCTTCGTCCCCAAAAACATTTTTGAGCAGCTACACCGGTTTGCCAATCTCTATTTT
GTGGGCATTGCGGTTCTGAATTTTATCCCTGTGGTCAATGCTTTCCAGCCTGAGGTGAGCATGATACCAA
TCTGTGTTATCCTGGCAGTCACTGCCATCAAGGACGCTTGGGAAGACCTCCGGAGGTACAAATCGGATAA
AGTCATCAATAACCGAGAGTGCCTCATCTACAGCAGAAAAGAGCAGACCTATGTGCAGAAGTGCTGGAAG
GATGTGCGCGTGGGAGACTTCATCCAAATGAAATGCAATGAGATTGTCCCAGCAGACATACTCCTCCTTT
TTTCCTCTGACCCCAATGGGATATGCCATCTGGAAACTGCCAGCTTGGATGGAGAGACAAACCTCAAGCA
AAGATGTGTCGTGAAGGGCTTCTCACAGCAGGAGGTACAGTTCGAACCAGAGCTTTTCCACAATACCATC
GTGTGTGAGAAACCCAACAACCACCTCAACAAATTTAAGGGTTATATGGAGCATCCTGACCAGACCAGGA
CTGGCTTTGGCTGTGAGAGTCTTCTGCTTCGAGGCTGCACCATCAGAAACACCGAGATGGCTGTTGGCAT
TGTCATCTATGCAGGCCATGAGACGAAAGCCATGCTGAACAACAGTGGCCCCCGGTACAAACGCAGCAAG
ATTGAGCGGCGCATGAATATAGACATCTTCTTCTGCATTGGGATCCTCATCCTCATGTGCCTTATTGGAG
CTGTAGGTCACAGCATCTGGAATGGGACCTTTGAAGAACACCCTCCCTTCGATGTGCCAGATGCCAATGG
CAGCTTCCTTCCCAGTGCCCTTGGGGGCTTCTACATGTTCCTCACAATGATCATCCTGCTCCAGGTGCTG
ATCCCCATCTCTTTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTTCTTGAGCAATGACC
TTGACCTGTATGATGAAGAGACCGATTTATCCATTCAATGTCGAGCCCTCAACATCGCAGAGGACTTGGG
CCAGATCCAGTACATCTTCTCCGATAAGACGGGGACCCTGACAGAGAACAAGATGGTGTTCCGACGTTGC
ACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGCTAAGCGACTGGAGACCCCAAAGGAGCTGGACT
CAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCCCAGGATCCAGCAAC
TATGAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAGCCAGAGTGCCCGGGTGCCCATCCAGGGCCAC
TACCGGCAAAGGTCTATGGGGCACCGTGAAAGCTCACAGCCTCCTGTGGCCTTCAGCAGCTCCATAGAAA
AAGATGTAACTCCAGATAAAAACCTACTGACCAAGGTTCGAGATGCTGCCCTGTGGTTGGAGACCTTGTC
AGACAGCAGACCTGCCAAGGCTTCCCTCTCCACCACCTCCTCCATTGCTGATTTCTTCCTTGCCTTAACC
ATCTGCAACTCTGTCATGGTGTCCACAACCACCGAGCCCAGGCAGAGGGTCACCATCAAACCCTCAAGCA
AGGCTCTGGGGACGTCCCTGGAGAAGATTCAGCAGCTCTTCCAGAAGTTGAAGCTATTGAGCCTCAGCCA
GTCATTCTCATCCACTGCACCCTCTGACACAGACCTCGGGGAGAGCTTAGGGGCCAACGTGGCCACCACA
GACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGACGGTGGCTACAGGA
GCAGCATGTGGGACCAGGGCGACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAGGAGGCATTGGAGGC
CCCAGCCACAGACCTGGCCAGGCCTGAGTTCTGTTACGAGGCTGAGAGCCCTGATGAGGCCGCCCTGGTG
CACGCTGCCCATGCCTACAGCTTCACACTAGTGTCCCGGACACCTGAGCAGGTGACTGTGCGCCTGCCCC
AGGGCACCTGCCTCACCTTCAGCCTCCTCTGCACCCTGGGCTTTGACTCTGTCAGGAAGAGAATGTCTGT
GGTTGTGAGGCACCCACTGACTGGCGAGATTGTTGTCTACACCAAGGGTGCTGACTCGGTCATCATGGAC
CTGCTGGAAGACCCAGCCTGCGTACCTGACATTAATATGGAAAAGAAGCTGAGAAAAATCCGAGCCCGGA
CCCAAAAGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCACACTATGCATTGCCAAGAAGGTTGTAAG
CGAAGAGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGGCTGAGGCATCCCTCGACAACCGAGATGAG
CTTCTCATGGAAACTGCACAGCATCTGGAGAATCAACTCACCTTACTTGGAGCCACTGGGATCGAAGACC
GGCTGCAGGAAGGAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTGGGATCCAGCTCTGGGTCCTGAC
TGGAGATAAGCAGGAGACAGCGGTCAACATTGCCCATTCCTGCAGACTGTTAAATCAGACCGACACTGTT
TATACCATCAATACAGAGAATCAGGAGACCTGTGAATCCATCCTCAATTGTGCATTGGAAGAGCTAAAGC
AATTTCGTGAACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCGCTTACCTTCCAAGACACCATCCAT
CACCTCAGAAGCTGTGGTTCCAGAAGCTGGATTGGTCATCGATGGGAAGACATTGAATGCCATCTTCCAG
GGAAAGCTAGAGAAGAAGTTTCTGGAATTGACCCAGTATTGTCGGTCCGTCCTGTGCTGCCGCTCCACGC
CACTCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGACCCTTTCCATAGGTGA
TGGAGCAAATGATGTAAGCATGATTCAAGCTGCTGATATTGGAATTGGAATATCTGGACAGGAAGGCATG
CAGGCTGTCATGTCCAGCGACTTTGCCATCACCCGCTTTAAGCATCTCAAGAAGTTGCTGCTCGTGCATG
GCCACTGGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACTACCTCTACAAGAACGTGTGCTACGTCAA
CCTGCTCTTCTGGTATCAGTTCTTCTGTGGTTTCTCCAGCTCCACCATGATTGATTACTGGCAGATGATA
TTCTTCAATCTCTTCTTTACCTCCTTGCCTCCTCTTGTCTTTGGAGTCCTTGACAAAGACATCTCTGCAG
AAACACTCCTGGCATTGCCTGAGCTATACAAGAGTGGCCAGAACTCTGAGTGCTATAACCTGTCGACTTT
CTGGATTTCTATGGTGGATGCATTCTACCAGAGCCTCATCTGTTTCTTTATCCCTTACCTGGCCTATAAG
GGCTCTGATATAGATGTCTTTACCTTTGGGACACCAATCAACACCATCTCCCTCACCACAATCCTTTTGC
ACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGGAGTCGTGCTCCTCGGCAGCTTCCTGATGTA
CTTTCTGGTATCCCTCCTGTACAATGCCACCTGCGTCATCTGCAACAGCCCCACCAATCCCTATTGGGTG
ATGGAAGGCCAGCTCTCAAACCCCACTTTCTACCTCGTCTGCTTTCTCACACCAGTTGTTGCTCTTCTCC
CAAGATACTTTTTCCTGTCTCTGCAAGGAACTTGTGGGAAGTCTCTAATCTCAAAAGCTCAGAAAATTGA
CAAACTCCCCCCAGACAAAAGAAACCTGGAAATCCAGAGTTGGAGAAGCAGACAGAGGCCTGCCCCTGTC
CCCGAAGTGGCTCGACCAACTCACCACCCAGTGTCATCTATCACAGGACAGGACTTCAGTGCCAGCACCC
CAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAACAGAGATGTGGCAC
GGAGTGCATGAGGGATGACTCATGCTCAGGGGACTCCTCAGCTCAACTCTCATCCGGGGAGCACCTGCTG
GGACCTAACAGGATAATGGCCTACTCAAGAGGACAGACTGATATGTGCCGGTGCTCAAAGAGGAGCAGCC
ATCGCCGATCCCAGAGTTCACTGACCATATGA

Translation (1433 aa):
MKKEGRKRWKRKEDKKRVVVSNLLFEGWSHKENPNRHHRGNQIKTSKYTVLSFVPKNIFEQLHRFANLYF
VGIAVLNFIPVVNAFQPEVSMIPICVILAVTAIKDAWEDLRRYKSDKVINNRECLIYSRKEQTYVQKCWK
DVRVGDFIQMKCNEIVPADILLLFSSDPNGICHLETASLDGETNLKQRCVVKGFSQQEVQFEPELFHNTI
VCEKPNNHLNKFKGYMEHPDQTRTGFGCESLLLRGCTIRNTEMAVGIVIYAGHETKAMLNNSGPRYKRSK
IERRMNIDIFFCIGILILMCLIGAVGHSIWNGTFEEHPPFDVPDANGSFLPSALGGFYMFLTMIILLQVL
IPISLYVSIELVKLGQVFFLSNDLDLYDEETDLSIQCRALNIAEDLGQIQYIFSDKTGTLTENKMVFRRC
TIMGSEYSHQENAKRLETPKELDSDGEEWTQYQCLSFSARWAQDPATMRSQKGAQPLRRSQSARVPIQGH
YRQRSMGHRESSQPPVAFSSSIEKDVTPDKNLLTKVRDAALWLETLSDSRPAKASLSTTSSIADFFLALT
ICNSVMVSTTTEPRQRVTIKPSSKALGTSLEKIQQLFQKLKLLSLSQSFSSTAPSDTDLGESLGANVATT
DSDERDDASVCSGGDSTDDGGYRSSMWDQGDILESGSGTSLEEALEAPATDLARPEFCYEAESPDEAALV
HAAHAYSFTLVSRTPEQVTVRLPQGTCLTFSLLCTLGFDSVRKRMSVVVRHPLTGEIVVYTKGADSVIMD
LLEDPACVPDINMEKKLRKIRARTQKHLDLYARDGLRTLCIAKKVVSEEDFRRWASFRREAEASLDNRDE
LLMETAQHLENQLTLLGATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLNQTDTV
YTINTENQETCESILNCALEELKQFRELQKPDRKLFGFRLPSKTPSITSEAVVPEAGLVIDGKTLNAIFQ
GKLEKKFLELTQYCRSVLCCRSTPLQKSMIVKLVRDKLRVMTLSIGDGANDVSMIQAADIGIGISGQEGM
QAVMSSDFAITRFKHLKKLLLVHGHWCYSRLARMVVYYLYKNVCYVNLLFWYQFFCGFSSSTMIDYWQMI
FFNLFFTSLPPLVFGVLDKDISAETLLALPELYKSGQNSECYNLSTFWISMVDAFYQSLICFFIPYLAYK
GSDIDVFTFGTPINTISLTTILLHQAMEMKTWTIFHGVVLLGSFLMYFLVSLLYNATCVICNSPTNPYWV
MEGQLSNPTFYLVCFLTPVVALLPRYFFLSLQGTCGKSLISKAQKIDKLPPDKRNLEIQSWRSRQRPAPV
PEVARPTHHPVSSITGQDFSASTPKSSNPPKRKHVEESVLHEQRCGTECMRDDSCSGDSSAQLSSGEHLL
GPNRIMAYSRGQTDMCRCSKRSSHRRSQSSLTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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