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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS94025.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
94025.1 |
Public |
Homo sapiens |
6 |
SYNJ2 |
24 |
110 |
108 |
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Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 94025.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000640338.1 |
ENSP00000492532.1 |
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Accepted |
alive |
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NCBI |
NM_001410947.1 |
NP_001397876.1 |
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Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001397876.1 |
1288 |
O15056-3 |
1288 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 94025.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3867 nt): ATGGCCCTGAGCAAAGGGCTGCGGCTGCTGGGGCGCCTGGGGGCCGAGGGGGACTGTAGCGTGCTGCTGG AGGCGCGCGGCCGCGACGACTGCCTGCTGTTCGAGGCCGGCACGGTGGCCACGCTGGCTCCAGAAGAAAA GGAAGTCATTAAAGGACAGTATGGCAAGCTCACGGACGCGTACGGCTGCCTGGGGGAGCTGAGGCTGAAA TCTGGTGGCACGTCTCTGAGCTTCCTGGTGTTGGTGACAGGCTGCACATCTGTGGGCAGAATTCCAGATG CTGAAATCTACAAAATCACTGCCACTGACTTTTACCCTCTTCAGGAAGAGGCCAAGGAGGAGGAACGCCT CATAGCTTTGAAGAAAATCCTCAGCTCGGGGGTGTTCTATTTCTCATGGCCAAACGATGGGTCTCGCTTT GACCTGACTGTCCGCACGCAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTTCTTCTGGAACC AGCTGTTGCACGTGCCCTTGAGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGATCATCTGCGG GGTGGTCACCATCCGCACCGTGTATGCCTCCCACAAGCAGGCCAAGGCCTGCCTCGTCTCTCGCGTTAGC TGTGAGCGCACAGGCACTCGCTTCCACACCCGTGGCGTGAACGACGACGGCCATGTGTCCAACTTCGTGG AGACAGAGCAGATGATTTACATGGACGATGGAGTGTCATCTTTTGTCCAGATCAGAGGCTCCGTTCCGCT GTTCTGGGAACAGCCAGGGCTTCAGGTTGGCTCCCATCATCTGAGACTCCACAGAGGCCTGGAAGCCAAT GCCCCTGCTTTCGACAGGCACATGGTGCTTCTGAAGGAGCAGTACGGGCAGCAGGTGGTCGTGAACCTTC TGGGAAGCAGAGGCGGAGAGGAGGTGCTCAACAGAGCCTTCAAGAAGCTGCTCTGGGCTTCTTGCCACGC GGGCGACACGCCTATGATCAATTTTGACTTCCATCAGTTTGCCAAAGGTGGGAAGCTAGAGAAATTGGAG ACCCTCTTGAGGCCACAGTTAAAGCTGCACTGGGAAGACTTCGATGTGTTCACAAAGGGGGAGAACGTCA GTCCACGTTTTCAGAAAGGCACTTTGCGGATGAACTGTCTTGACTGCCTGGACCGAACCAACACTGTGCA GAGCTTCATCGCGCTCGAGGTCCTGCATCTGCAGCTCAAGACCCTGGGGCTGAGTTCAAAACCCATCGTT GACCGCTTTGTGGAGTCCTTCAAAGCCATGTGGTCTCTGAATGGCCACAGCCTGAGCAAGGTGTTCACAG GCAGCAGAGCCCTGGAAGGGAAGGCCAAGGTGGGGAAGCTGAAGGATGGAGCCCGGTCCATGTCTCGAAC CATCCAGTCCAACTTCTTCGACGGGGTGAAGCAGGAGGCCATCAAGCTGCTGCTGGTTGGGGACGTCTAC GGCGAGGAGGTGGCAGACAAAGGGGGCATGCTGCTGGACAGCACGGCGCTCCTGGTGACTCCCAGGATCC TGAAAGCTATGACTGAGCGTCAGTCCGAATTCACAAATTTCAAGCGGATCCGGATTGCTATGGGGACCTG GAACGTGAACGGAGGAAAGCAGTTCCGGAGCAACGTGCTCAGGACGGCGGAGCTGACAGACTGGCTGCTC GACTCGCCCCAGCTCTCGGGAGCTACCGACTCCCAGGATGACAGCAGCCCAGCTGACATATTTGCTGTGG GGTTTGAAGAGATGGTGGAATTGAGCGCAGGGAATATTGTCAATGCCAGTACTACCAACAAGAAGATGTG GGGTGAACAGCTTCAGAAAGCCATCTCACGCTCTCATAGATACATTCTGTTGACTTCGGCACAGCTGGTG GGCGTCTGTCTTTATATCTTTGTACGTCCATACCATGTCCCGTTCATCAGGGACGTAGCCATCGACACAG TGAAGACGGGCATGGGGGGCAAGGCGGGGAACAAGGGCGCCGTCGGCATCCGCTTCCAGTTCCACAGCAC CAGCTTCTGCTTCATATGTAGTCACCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAATGAAGACTAC AAGGAGATCACCCAGAAACTCTGCTTCCCAATGGGGAGAAATGTTTTTTCTCATGATTATGTATTTTGGT GTGGCGATTTCAACTACCGCATTGATCTTACTTATGAAGAAGTCTTCTATTTTGTTAAACGCCAAGACTG GAAGAAACTTCTGGAATTTGATCAACTACAGCTACAGAAATCAAGTGGAAAAATTTTTAAGGACTTTCAC GAAGGAGCCATTAACTTTGGACCCACCTACAAGTATGACGTTGGCTCAGCCGCCTACGATACAAGCGACA AATGCCGCACCCCCGCCTGGACAGACAGGGTGCTGTGGTGGAGGAAGAAACATCCCTTTGATAAAACAGC TGGAGAACTCAACCTTCTAGACAGTGATCTAGATGTTGACACCAAAGTCAGACACACCTGGTCTCCTGGT GCCCTGCAGTATTATGGTCGTGCGGAGCTACAAGCGTCTGATCACAGACCTGTGCTGGCGATCGTGGAGG TGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTTCCAGGGCCC CCTGGATGCCACTGTTGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGAGGAC CTGCGTACTGAGCTCATGCAGACCTTGGGGAGTTATGGGACAATTGTTCTTGTCAGGATCAACCAAGGGC AGATGCTGGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGGACGGTATGAAGGTGAA AGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGG AAACGAGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCA CAAGTTTGGACTATGAGTCAGAAGGGGATATTCTTGAAGACGATGAAGACTACTTGGTGGATGAATTCAA TCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAGACGACCTCTCTGATGTCCCCGGCCCCACAGCACTG GCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGCGGACC TGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTC GGTCCCCAACCGGCCTCGGCCACCTCAACCCCCGCAGAGACCCCCCCCTCCAACCGGTTTAATGGTGAAA AAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGAC TTCTACCAGGAGCACCTCAGCAACCTCCCAAGGCTCGGACTGGAATAAGTAAACCTTATAATGTCAAGCA GATCAAAACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCC TCCGAAGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACACCGG GGGCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGC CATCAAGAAGCCAACCTTGAGAAGGACAGGAAAGATTGTTTTTTGCTCTCGCTCTCAAGCTTCTCAGCCT TGCTTACTGCTTCAAAGACATGAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGACACAT CTGGATCTTCCGTTTGA
Translation (1288 aa): MALSKGLRLLGRLGAEGDCSVLLEARGRDDCLLFEAGTVATLAPEEKEVIKGQYGKLTDAYGCLGELRLK SGGTSLSFLVLVTGCTSVGRIPDAEIYKITATDFYPLQEEAKEEERLIALKKILSSGVFYFSWPNDGSRF DLTVRTQKQGDDSSEWGNSFFWNQLLHVPLRQHQVSCCDWLLKIICGVVTIRTVYASHKQAKACLVSRVS CERTGTRFHTRGVNDDGHVSNFVETEQMIYMDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGLEAN APAFDRHMVLLKEQYGQQVVVNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGGKLEKLE TLLRPQLKLHWEDFDVFTKGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLHLQLKTLGLSSKPIV DRFVESFKAMWSLNGHSLSKVFTGSRALEGKAKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLLLVGDVY GEEVADKGGMLLDSTALLVTPRILKAMTERQSEFTNFKRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLL DSPQLSGATDSQDDSSPADIFAVGFEEMVELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLV GVCLYIFVRPYHVPFIRDVAIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDY KEITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFH EGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELNLLDSDLDVDTKVRHTWSPG ALQYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPED LRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREEIIR KRDSMAPVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFNQPGVSDSELGGDDLSDVPGPTAL APPSKSPALTKKKQHPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVPNRPRPPQPPQRPPPPTGLMVK KSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGA SEEALSAVAPRDLEASSEPEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRTGKIVFCSRSQASQP CLLLQRHEFVRTVAAQRLASVDTSGSSV
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