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Report for CCDS94096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94096.1 Public Homo sapiens 7 CCDC201 24 110 108 CCDS HistoryNCBI Gene:114515518Re-query CCDS DB by CCDS ID:94096.1Re-query CCDS DB by GeneID:114515518See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94096.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636578.2 ENSP00000489712.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000636578.2Link to Ensembl Protein Viewer:ENSP00000489712.1Re-query CCDS DB by Nucleotide ID:ENST00000636578Re-query CCDS DB by Protein ID:ENSP00000489712
Original member Current member NCBI NM_001395235.1 NP_001382164.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395235.1Link to Protein Sequence:NP_001382164.1Re-query CCDS DB by Nucleotide ID:NM_001395235Re-query CCDS DB by Protein ID:NP_001382164Link to BLAST:NP_001382164.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382164.1 187 A0A1B0GTI1 187 100% 0 0

Chromosomal Locations for CCDS 94096.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45863085 45863171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45866036 45866494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45872990 45873007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGGAGCCTGGGGTGCAGGATCTAGGATTGAGCTCCTCTGAGGATGAGAGCCCCTCTCTAGCAATCAGGA
GCCCCACCTTGAGAAAGCCCCTGAAACACAGCACCCCTGAGGAGGCAGCCCTGGGTTGGAGCCCAAGGCC
ATCGGGAGGTGCCTCCTATCTCAGTGGGTCCCCAATGCCTGCACACTTCTCTCAGGACCTTGCATCCCAC
CCAGCAGGGGTCAGCCCTCCAGCCACTGTTAGGAAAAGGAGGCTTTCTACTCTCTGGGCCTCCAAGGAGT
CCAGCTTGGATCTCTCAGCTCCTGGGGAGGAGCCGCCCACATCAGCCTCCTTAACCCAGCGGCAGCGGCA
GCGGCAGCAGCAGCAGCAGCAGCAAGAGTCCCTCCGGGCAAAGAGCTGGGCACAAAACCCTGGATTGCCT
GGGATCCTGAACACAACAGGGAGGAAGAGACGAGACCCGAAGAAGCGGGCAGCTGCGATGGAGCGAGTGC
GACAGTGGGAGATCTACGTGCTTCAGAACATTGAGGAAGCCACCCAGCATGAGCTCACCATCGAAGATGA
CTGA

Translation (187 aa):
MEPGVQDLGLSSSEDESPSLAIRSPTLRKPLKHSTPEEAALGWSPRPSGGASYLSGSPMPAHFSQDLASH
PAGVSPPATVRKRRLSTLWASKESSLDLSAPGEEPPTSASLTQRQRQRQQQQQQQESLRAKSWAQNPGLP
GILNTTGRKRRDPKKRAAAMERVRQWEIYVLQNIEEATQHELTIEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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