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Report for CCDS94100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94100.1 Public Homo sapiens 7 TNS3 24 110 108 CCDS HistoryNCBI Gene:64759Re-query CCDS DB by CCDS ID:94100.1Re-query CCDS DB by GeneID:64759See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457718.6 ENSP00000414358.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457718.6Link to Ensembl Protein Viewer:ENSP00000414358.2Re-query CCDS DB by Nucleotide ID:ENST00000457718Re-query CCDS DB by Protein ID:ENSP00000414358
Current member NCBI NM_001410878.1 NP_001397807.1 Accepted alive Link to Nucleotide Sequence:NM_001410878.1Link to Protein Sequence:NP_001397807.1Re-query CCDS DB by Nucleotide ID:NM_001410878Re-query CCDS DB by Protein ID:NP_001397807Link to BLAST:NP_001397807.1

Chromosomal Locations for CCDS 94100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 47278076 47278220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280164 47280190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47280286 47280354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47283697 47283865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47291955 47292032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47292828 47292905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47293733 47293828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47297082 47297213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302186 47302272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47302950 47303584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47304832 47305003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344755 47344838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47344924 47345038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47346187 47346356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47368365 47369621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47396800 47396904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400393 47400458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47400785 47400914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47411727 47411802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47413937 47413997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47415094 47415206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47424101 47424184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47428312 47428376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47435282 47435404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47437263 47437313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47439487 47439658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47442003 47442055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47481103 47481141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47506907 47506944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47529036 47529147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 47582427 47582471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4647 nt):
ATGAACTGGTTGTGCAGGAACCAGGATCCGAACCCGCCTCCCCAGCCGGAAGAATTAACCTCGAGTCTGC
ACGCTTTTAAGAACAAGGCCTTTAAAAAATCCAAAGTGTGTGGAGTTTGCAAACAAATTATTGACGGTCA
AGGTATTTCATGCCGAGCCTGCAAGTATTCCTGCCACAAGAAATGTGAAGCCAAGGTGGTGATTCCCTGC
GGTGTGCAAGTCCGACTGGAACAGGCTCCAGGGAGTTCCACGCTGTCCAGTTCTCTCTGCCGTGATAAAC
CTCTGCGGCCCGTCATCCTGAGTCCCACCATGGAGGAGGGCCATGGGCTGGACCTCACTTACATCACGGA
GCGCATCATCGCTGTGTCCTTCCCTGCCGGCTGCTCTGAGGAGTCCTACCTGCACAACCTACAGGAGGTC
ACGCGCATGCTCAAGTCCAAGCACGGGGACAACTACCTGGTATTAAACCTTTCAGAAAAGAGATATGACC
TTACGAAGCTTAACCCAAAGATCATGGATGTGGGCTGGCCAGAGCTCCACGCACCGCCCCTGGATAAGAT
GTGTACCATATGCAAGGCGCAGGAGTCCTGGCTGAACAGCAACCTCCAGCATGTGGTCGTCATTCACTGC
AGGGGCGGGAAAGGACGCATAGGAGTGGTCATATCATCCTACATGCATTTCACCAACGTCTCAGCCAGCG
CCGACCAGGCCCTTGACAGGTTTGCAATGAAGAAGTTTTATGATGACAAAGTTTCAGCTTTAATGCAGCC
TTCCCAAAAACGGTATGTTCAGTTCCTCAGTGGGCTCCTGTCCGGATCGGTGAAAATGAATGCCTCTCCC
CTGTTCCTGCATTTTGTCATCCTCCACGGCACCCCCAACTTCGACACAGGTGGAGTGTGCCGGCCCTTTC
TGAAGCTCTACCAAGCCATGCAGCCTGTGTACACCTCCGGGATCTACAACGTTGGCCCAGAAAACCCCAG
CAGGATCTGCATCGTCATCGAGCCGGCCCAGCTTCTGAAGGGAGATGTCATGGTGAAATGCTACCACAAG
AAATACCGCTCGGCCACCCGTGACGTCATTTTCCGCCTGCAGTTTCACACTGGGGCTGTGCAGGGCTACG
GGCTGGTGTTTGGGAAGGAGGATCTGGACAATGCCAGCAAAGATGACCGTTTTCCTGACTATGGGAAGGT
TGAATTAGTCTTCTCTGCCACGCCTGAGAAGATTCAAGGGTCCGAACACTTGTACAACGACCACGGTGTG
ATTGTGGACTACAACACAACAGACCCACTGATACGCTGGGACTCGTACGAGAACCTCAGTGCAGATGGAG
AAGTGCTACACACGCAGGGCCCTGTCGATGGCAGCCTTTACGCGAAGGTGAGGAAGAAAAGCTCCTCGGA
TCCTGGCATCCCAGGTGGCCCCCAGGCAATCCCGGCCACCAACAGCCCAGACCACAGTGACCACACCTTG
TCTGTCAGCAGTGACTCCGGCCACTCTACAGCCTCTGCCAGGACGGATAAGACGGAAGAGCGCCTGGCCC
CAGGAACCAGGAGGGGCCTGAGTGCCCAGGAGAAGGCAGAGTTGGACCAGCTGCTCAGTGGCTTTGGCCT
GGAAGATCCTGGAAGCTCCCTCAAGGAAATGACTGATGCTCGAAGCAAGTACAGTGGGACCCGCCACGTG
GTGCCAGCCCAGGTTCACGTGAATGGAGACGCTGCTCTGAAGGATCGGGAGACAGACATTCTGGATGACG
AGATGCCCCACCACGACCTGCACAGTGTGGACAGCCTTGGGACCCTGTCCTCCTCGGAAGGGCCTCAGTC
GGCCCACCTGGGTCCCTTCACCTGCCACAAGAGCAGCCAGAACTCACTCCTATCTGACGGTTTTGGCAGC
AACGTTGGTGAAGATCCGCAGGGCACCCTCGTTCCGGACCTGGGCCTTGGCATGGACGGCCCCTATGAGC
GGGAGCGGACTTTTGGGAGTCGAGAGCCCAAGCAGCCCCAGCCCCTGCTGAGAAAGCCCTCAGTGTCCGC
CCAGATGCAGGCCTATGGGCAGAGCAGCTACTCCACACAGACCTGGGTGCGCCAGCAGCAGATGGTTGTA
GCTCACCAGTATAGCTTCGCCCCAGATGGGGAGGCCCGGCTGGTGAGCCGCTGCCCTGCAGACAATCCTG
GCCTCGTCCAGGCCCAGCCCAGAGTGCCACTCACCCCCACCCGAGGGACCAGCAGTAGGGTGGCTGTCCA
GAGGGGTGTAGGCAGTGGGCCACATCCCCCTGACACACAGCAGCCCTCTCCCAGCAAAGCGTTCAAACCC
AGGTTTCCAGGAGACCAGGTTGTGAATGGAGCCGGCCCAGAGCTGAGCACAGGCCCCTCCCCAGGCTCGC
CCACCCTGGACATCGACCAGTCCATCGAGCAGCTCAACAGGCTGATCCTGGAGCTGGATCCCACCTTCGA
GCCCATCCCTACCCACATGAACGCCCTCGGTAGCCAGGCCAATGGCTCTGTGTCTCCAGACAGCGTGGGA
GGTGGGCTCCGGGCAAGCAGCAGGCTGCCTGACACAGGAGAGGGCCCCAGCAGGGCCACCGGGCGGCAAG
GCTCCTCTGCTGAACAGCCCCTGGGCGGGAGACTCAGGAAGCTGAGCCTGGGGCAGTACGACAACGATGC
TGGGGGGCAGCTGCCCTTCTCCAAATGTGCATGGGGAAAGGCTGGTGTGGACTATGCCCCAAACCTGCCG
CCATTCCCCTCACCAGCGGACGTCAAAGAGACGATGACCCCTGGCTATCCCCAGGACCTCGATATTATCG
ATGGCAGAATTTTAAGTAGCAAGGAGTCCATGTGTTCAACTCCAGCATTTCCTGTGTCTCCAGAGACACC
GTATGTGAAAACAGCGCTGCGCCATCCTCCGTTCAGCCCACCTGAGCCCCCGCTGAGCAGCCCAGCCAGT
CAGCACAAAGGAGGACGTGAACCACGAAGCTGCCCTGAGACGCTCACTCACGCTGTGGGGATGTCAGAGA
GCCCCATCGGACCCAAATCCACGATGCTCCGGGCTGATGCGTCCTCGACGCCCTCCTTTCAGCAGGCTTT
TGCTTCTTCCTGCACCATTTCCAGCAACGGCCCTGGGCAGAGGAGAGAGAGCTCCTCTTCTGCAGAACGC
CAGTGGGTGGAGAGCAGCCCCAAGCCCATGGTTTCCCTGCTGGGGAGCGGCCGGCCCACCGGAAGTCCCC
TCAGCGCTGAGTTCTCCGGTACCAGGAAGGACTCCCCAGTGCTGTCCTGCTTCCCGCCGTCAGAGCTCCA
GGCTCCTTTCCACAGCCATGAGCTGTCCCTAGCAGAGCCACCGGACTCCCTGGCGCCTCCCAGCAGCCAG
GCCTTCCTGGGCTTCGGCACCGCCCCAGTGGGAAGTGGCCTTCCGCCCGAGGAGGACCTGGGGGCCTTGC
TGGCCAATTCTCATGGAGCGTCACCGACCCCCAGCATCCCGCTGACAGCGACAGGGGCTGCCGACAATGG
CTTCCTGTCCCACAACTTTCTCACGGTGGCGCCTGGACACAGCAGCCACCACAGTCCAGGCCTGCAGGGC
CAGGGTGTGACCCTGCCCGGGCAGCCACCCCTCCCTGAGAAGAAGCGGGCCTCGGAGGGGGATCGTTCTT
TGGGCTCAGTCTCTCCCTCCTCCAGTGGCTTCTCCAGCCCGCACAGCGGGAGCACCATCAGTATCCCCTT
CCCAAATGTCCTTCCCGACTTTTCCAAGGCTTCAGAAGCGGCCTCACCTCTGCCAGATAGTCCAGGTGAT
AAACTTGTGATCGTGAAATTTGTTCAAGACACTTCCAAGTTCTGGTACAAGGCGGATATTTCAAGAGAAC
AAGCCATCGCCATGTTGAAGGACAAGGAGCCGGGCTCATTCATTGTTCGAGACAGCCATTCCTTCCGAGG
GGCCTATGGCCTGGCCATGAAGGTGGCCACGCCCCCACCTTCAGTCCTGCAGCTGAACAAGAAAGCTGGA
GATTTGGCCAATGAACTCGTCCGGCACTTTTTGATCGAGTGTACCCCGAAGGGAGTGCGGTTGAAAGGGT
GCTCGAATGAACCATATTTCGGGAGCCTGACGGCCTTGGTGTGCCAGCATTCCATCACGCCCTTGGCCTT
GCCGTGCAAGCTGCTTATCCCAGAGAGAGATCCATTGGAGGAAATAGCAGAAAGTTCTCCCCAGACGGCA
GCCAATTCAGCAGCTGAGCTGTTGAAGCAGGGGGCAGCCTGCAATGTGTGGTACTTGAACTCTGTGGAGA
TGGAGTCCCTCACCGGCCACCAGGCGATCCAGAAGGCCCTGAGCATCACCCTGGTCCAGGAGCCTCCACC
TGTGTCCACAGTTGTGCACTTCAAGGTGTCAGCCCAGGGCATCACCCTGACAGACAATCAGAGGAAGCTC
TTCTTCCGGAGGCATTACCCCGTGAACAGTGTGATTTTCTGTGCCTTGGACCCACAAGACAGGAAGTGGA
TCAAAGATGGCCCTTCCTCAAAAGTCTTTGGATTTGTGGCCCGGAAGCAGGGCAGTGCCACGGATAATGT
GTGCCACCTGTTTGCAGAGCATGACCCTGAGCAGCCTGCCAGTGCCATTGTCAACTTCGTATCAAAGGTC
ATGATTGGTTCCCCAAAGAAGGTCTGA

Translation (1548 aa):
MNWLCRNQDPNPPPQPEELTSSLHAFKNKAFKKSKVCGVCKQIIDGQGISCRACKYSCHKKCEAKVVIPC
GVQVRLEQAPGSSTLSSSLCRDKPLRPVILSPTMEEGHGLDLTYITERIIAVSFPAGCSEESYLHNLQEV
TRMLKSKHGDNYLVLNLSEKRYDLTKLNPKIMDVGWPELHAPPLDKMCTICKAQESWLNSNLQHVVVIHC
RGGKGRIGVVISSYMHFTNVSASADQALDRFAMKKFYDDKVSALMQPSQKRYVQFLSGLLSGSVKMNASP
LFLHFVILHGTPNFDTGGVCRPFLKLYQAMQPVYTSGIYNVGPENPSRICIVIEPAQLLKGDVMVKCYHK
KYRSATRDVIFRLQFHTGAVQGYGLVFGKEDLDNASKDDRFPDYGKVELVFSATPEKIQGSEHLYNDHGV
IVDYNTTDPLIRWDSYENLSADGEVLHTQGPVDGSLYAKVRKKSSSDPGIPGGPQAIPATNSPDHSDHTL
SVSSDSGHSTASARTDKTEERLAPGTRRGLSAQEKAELDQLLSGFGLEDPGSSLKEMTDARSKYSGTRHV
VPAQVHVNGDAALKDRETDILDDEMPHHDLHSVDSLGTLSSSEGPQSAHLGPFTCHKSSQNSLLSDGFGS
NVGEDPQGTLVPDLGLGMDGPYERERTFGSREPKQPQPLLRKPSVSAQMQAYGQSSYSTQTWVRQQQMVV
AHQYSFAPDGEARLVSRCPADNPGLVQAQPRVPLTPTRGTSSRVAVQRGVGSGPHPPDTQQPSPSKAFKP
RFPGDQVVNGAGPELSTGPSPGSPTLDIDQSIEQLNRLILELDPTFEPIPTHMNALGSQANGSVSPDSVG
GGLRASSRLPDTGEGPSRATGRQGSSAEQPLGGRLRKLSLGQYDNDAGGQLPFSKCAWGKAGVDYAPNLP
PFPSPADVKETMTPGYPQDLDIIDGRILSSKESMCSTPAFPVSPETPYVKTALRHPPFSPPEPPLSSPAS
QHKGGREPRSCPETLTHAVGMSESPIGPKSTMLRADASSTPSFQQAFASSCTISSNGPGQRRESSSSAER
QWVESSPKPMVSLLGSGRPTGSPLSAEFSGTRKDSPVLSCFPPSELQAPFHSHELSLAEPPDSLAPPSSQ
AFLGFGTAPVGSGLPPEEDLGALLANSHGASPTPSIPLTATGAADNGFLSHNFLTVAPGHSSHHSPGLQG
QGVTLPGQPPLPEKKRASEGDRSLGSVSPSSSGFSSPHSGSTISIPFPNVLPDFSKASEAASPLPDSPGD
KLVIVKFVQDTSKFWYKADISREQAIAMLKDKEPGSFIVRDSHSFRGAYGLAMKVATPPPSVLQLNKKAG
DLANELVRHFLIECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDPLEEIAESSPQTA
ANSAAELLKQGAACNVWYLNSVEMESLTGHQAIQKALSITLVQEPPPVSTVVHFKVSAQGITLTDNQRKL
FFRRHYPVNSVIFCALDPQDRKWIKDGPSSKVFGFVARKQGSATDNVCHLFAEHDPEQPASAIVNFVSKV
MIGSPKKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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