NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, June 25, 2024, starting at 8:00 a.m. EDT for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94104.1 Public Homo sapiens 7 COBL 24 110 108 CCDS HistoryNCBI Gene:23242Re-query CCDS DB by CCDS ID:94104.1Re-query CCDS DB by GeneID:23242See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431948.6 ENSP00000413498.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431948.6Link to Ensembl Protein Viewer:ENSP00000413498.2Re-query CCDS DB by Nucleotide ID:ENST00000431948Re-query CCDS DB by Protein ID:ENSP00000413498
Current member NCBI NM_001410881.1 NP_001397810.1 Accepted alive Link to Nucleotide Sequence:NM_001410881.1Link to Protein Sequence:NP_001397810.1Re-query CCDS DB by Nucleotide ID:NM_001410881Re-query CCDS DB by Protein ID:NP_001397810Link to BLAST:NP_001397810.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397810.1 1343 O75128-2 1343 100% 0 0

Chromosomal Locations for CCDS 94104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 51017551 51017568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51025109 51025372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51026546 51026665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51027712 51029591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51030812 51030909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51043383 51043692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51083058 51083228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51085166 51085304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51136158 51136331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51172456 51172530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51184102 51184199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51190850 51191078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51193379 51193589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51219741 51219944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51316593 51316633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4032 nt):
ATGGACGCGCCGCGCGCCTCGGCGGCCAAGCCCCCGACCGGGAGGAAGATGAAGGCTCGTGCTCCCCCAC
CTCCTGGAAAGGCTGCCACTCTGCATGTGCACAGTGACCAGAAGCCCCCCCACGATGGGGCCCTCGGGTC
GCAGCAGAACTTGGTTCGCATGAAGGAGGCGCTGAGGGCCAGCACCATGGACGTCACCGTGGTCCTGCCT
AGTGGGCTGGAGAAGAGGAGCGTGCTCAATGGGAGCCATGCGATGATGGACCTACTGGTTGAACTTTGCC
TTCAGAACCACCTGAATCCATCCCACCATGCCCTTGAAATTCGGTCTTCAGAAACCCAACAACCTTTGAG
TTTTAAGCCAAATACTTTGATTGGGACCCTGAATGTGCATACTGTGTTTCTGAAAGAAAAAGTTCCTGAA
GAGAAGGTTAAGCCTGGTCCCCCTAAGGTGCCTGAGAAATCTGTGCGTTTGGTCGTGAATTACCTGCGGA
CACAAAAAGCTGTTGTGCGTGTGAGCCCTGAGGTTCCTCTCCAGAATATTCTCCCAGTCATTTGTGCAAA
GTGTGAGGTCAGCCCAGAGCACGTGGTTCTCCTCAGGGACAACATTGCCGGAGAGGAGCTGGAGCTGTCC
AAGTCCCTGAACGAGCTCGGGATAAAGGAGCTCTACGCGTGGGACAACAGAAGAGAAACCTTTAGGAAAT
CATCACTTGGCAATGATGAGACAGATAAAGAGAAGAAAAAATTTCTGGGATTTTTCAAAGTTAATAAAAG
AAGCAATAGTAAGGCTGAGCAGCTCGTGCTGTCGGGTGCAGACAGCGATGAGGACACCTCCAGGGCTGCC
CCAGGAAGGGGTTTGAACGGCTGTTTAACGACCCCCAACTCCCCATCCATGCACTCACGTTCTCTTACGC
TGGGTCCATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCGTGAAGTCGGAGATGAAGAAGCGCCGAGC
CCCTCCTCCTCCAGGTTCAGGGCCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCTCTTGGGTCACAG
ATTGATTTACAGAAGAAGAAGCGGCGAGCGCCAGCTCCCCCTCCACCACAGCCACCACCACCGAGTCCCC
TGATCCCCAACCGCACTGAGGATAAGGAGGAGAACAGGAAGAGCACGATGGGTGGTGGACGGCAGGTGCC
ACAAAAGCCTCCCAGAGGCACTGCTCGGGGTCCACCCCAGTTAGTGCTTCCCCCACCCCCGCCCTACCCT
CCTCCCGACACAGACGTGGTGGAGCCTCTCAGCTTTCCCGGGGAAGGCGCTGGTTCCGAGGCCTCAGACC
CGATACCCAAACTAAGCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGGAGCCCCGCAGGTGCT
GTCAGAGGCGGAGGAGACCGTGTCAGTTGGCAGCTGTTTTGCGTCGGAGGACACGACCGAGGACTCAGGA
GTGATGAGTTCCCCCTCAGACATCGTCTCTCTGGACTCGCAGCAGGACAGCATGAAATACAAAGACAAGT
GGGCCACAGACCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAACCCCAGACCTGGGTCCCCAGAAGAG
CCCCTTGTGGGAGAAGAATGGCTCTGAGAACTCACATCTGAGAACTGAAAAAGCTGTCACAGCCTCAAAT
GATGAAGAAGACCTATTAATTGCTGGAGAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGACCTGGAAG
AAATGGAAGACAGCTATGAAACAGACACCAGCTCCCTCACCAGCTCCATCCATGGTGCATCCAACCACTG
CCCACAGGATGCCATGATCCCTCACGGCGACACAGATGCAATCCCAGTAACATTCATAGGGGAAGTTTCA
GATGATCCTGTGGATTCGGGGTTGTTTTCCAATAGAAACAACAATGCTGGGTCTTTCGACTCGGAGGGTG
TTGCCAGCAGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA
GGAAGTACCTGCCCTGCACCCCGCTTCCCATGACGTCGGAAAAGGAATCCGTGTGGCCTTATCTAACATC
TCTAAAGATGGGAATCTAATGGAAACGGCGCCCAGGGTGACTTCTTTTGCTTCGAATCTTCACACAGACA
ACCTAAATGCAAAAGTGAAAGACAAAGTGTATGGCTGTGCTGACGGGGAGAGGACTCAAGCCACAGAGAG
AGTGAATTCCCAACCGGTGAATGAAAAGGACAGCAACGATAAAAACGCTGCCTTGGCACCAACATCATGG
CACCAACGAGGCCAAAACCCAGGGAAAAGCTACAGACTTAAGCACGGCCTCACAACGTATAAAATCATTC
CTCCAAAGTCAGAGATGCGATGTTACGACAGAGATGTGTCCCTCTCCACCGGAGCCATTAAGATTGACGA
GCTGGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAGGATCATTTCCCTGTCTTCGTCTGTGCCTGAA
GCAGAATCTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGTGCAACTCTGTGGAAAAACACCTGGGCC
GACCCTCAGAGAGCTCTGCCAGGGGACCCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGAGAG
CAGACTCCAAGCAGACCCCAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCCC
CTAGGGGAGGGGAGAAACCAGCCCCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGCAGCTCACACCA
CAGAAGTCACATTTCTCAAGCCTCAGAGAAGAACGTCCAGCCAGTATGTGGCCTCTGCCATTGCCAAGCG
CATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAGGCCACACGGTTATGCCGAGAAGGGTTATGCAGGC
AAGGCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAAGATGACAGGACATCCAGCCCACACTCAGAGA
CACAAGGATGGAAGGATGGTGCCCAGTGGCCCTGTGTCACTCCTCCCAACAACCACGGGGAAGATTTGGC
AGTGGGAGCCCCTCCTAGGGGGGAGGTCATTGGCCCACACAGGAAGTTGTCTACTCAGGACAGACCTGCT
GCTATCCACAGAAGCTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGATCGTGTTTCTGTGGGACAGA
GCTGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGCCCAGACGCGC
ACCTGATGGTACAGACCCACCCCCTCCACACACATCTGACACTCAGGCCTGCAGCAGGGAGCTGGTCAAT
GGCTCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACAGAAAGCCACA
TTCTCCTAGAAAGAGAGGAAAAGCCCAGTGTGTTCTCTACAGATGGAAATGAAACAGACAGTATTTGGCC
ACCCAGCATTTTTGGGCCGAAGAAAAAATTCAAACCTGTTGTCCAGAGACCAGTCCCAAAAGACACATCC
CTGCACTCTGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAAGGACAGACTACGCAAGACGGCAGAAC
ACACCGGGGAGGGCAGGCCAGCGAAACTGTCCTACACGGAGGCAGAGGGCGAACGATCTGCACTGCTGGC
AGCTATCCGCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGTGGCATCCTCTGCTTCTGAGGAGCTCCAG
AGCTTCCGAGATGCCGCACTCTCTGCTCAGGGCTCGGAAAGTCCTCTGCTAGAAGACCTTGGTCTTCTGT
CCCCACCAGCCATTCCCCCACCACCCCCTCCACCCTCCCAGGCTCTCTCTGCACCAAGGACGGCCTCCAG
GTTCAGCACGGGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATGGACGCCATCCGCTCCGGC
ACAGGGGCTGCGAGACTGAGAAAGGTGCCCTTGCTCGTGTGA

Translation (1343 aa):
MDAPRASAAKPPTGRKMKARAPPPPGKAATLHVHSDQKPPHDGALGSQQNLVRMKEALRASTMDVTVVLP
SGLEKRSVLNGSHAMMDLLVELCLQNHLNPSHHALEIRSSETQQPLSFKPNTLIGTLNVHTVFLKEKVPE
EKVKPGPPKVPEKSVRLVVNYLRTQKAVVRVSPEVPLQNILPVICAKCEVSPEHVVLLRDNIAGEELELS
KSLNELGIKELYAWDNRRETFRKSSLGNDETDKEKKKFLGFFKVNKRSNSKAEQLVLSGADSDEDTSRAA
PGRGLNGCLTTPNSPSMHSRSLTLGPSLSLGSISGVSVKSEMKKRRAPPPPGSGPPVQDKASEKVSLGSQ
IDLQKKKRRAPAPPPPQPPPPSPLIPNRTEDKEENRKSTMGGGRQVPQKPPRGTARGPPQLVLPPPPPYP
PPDTDVVEPLSFPGEGAGSEASDPIPKLSLPLGSGSHCSPDGAPQVLSEAEETVSVGSCFASEDTTEDSG
VMSSPSDIVSLDSQQDSMKYKDKWATDQEDCSDQDLAGTPDLGPQKSPLWEKNGSENSHLRTEKAVTASN
DEEDLLIAGEFRKTLAELDEDLEEMEDSYETDTSSLTSSIHGASNHCPQDAMIPHGDTDAIPVTFIGEVS
DDPVDSGLFSNRNNNAGSFDSEGVASRRDSLAPLQAEHSQPHEKAREEVPALHPASHDVGKGIRVALSNI
SKDGNLMETAPRVTSFASNLHTDNLNAKVKDKVYGCADGERTQATERVNSQPVNEKDSNDKNAALAPTSW
HQRGQNPGKSYRLKHGLTTYKIIPPKSEMRCYDRDVSLSTGAIKIDELGNLVSPHATGIRIISLSSSVPE
AESQPIGKVREFWRCNSVEKHLGRPSESSARGPPSTPVPTQTQNPESRLQADPKPISPQQKSAHHEGRNP
LGEGRNQPPTMGMGHVRVPAAHTTEVTFLKPQRRTSSQYVASAIAKRIGAPKVHADVVRPHGYAEKGYAG
KAPVLAAPPVTVKDDRTSSPHSETQGWKDGAQWPCVTPPNNHGEDLAVGAPPRGEVIGPHRKLSTQDRPA
AIHRSSCFSLVQSSQRDRVSVGQSCGFSGKQSTSSQEASSASEPRRAPDGTDPPPPHTSDTQACSRELVN
GSVRAPGHGEPSHPPGGSGTESHILLEREEKPSVFSTDGNETDSIWPPSIFGPKKKFKPVVQRPVPKDTS
LHSALMEAIHSAGGKDRLRKTAEHTGEGRPAKLSYTEAEGERSALLAAIRGHSGTCSLRKVASSASEELQ
SFRDAALSAQGSESPLLEDLGLLSPPAIPPPPPPPSQALSAPRTASRFSTGTLSNTADARQALMDAIRSG
TGAARLRKVPLLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH