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Report for CCDS94164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94164.1 Public Homo sapiens 7 FBXL13 24 110 108 CCDS HistoryNCBI Gene:222235Re-query CCDS DB by CCDS ID:94164.1Re-query CCDS DB by GeneID:222235See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440067.3 ENSP00000390126.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440067.3Link to Ensembl Protein Viewer:ENSP00000390126.2Re-query CCDS DB by Nucleotide ID:ENST00000440067Re-query CCDS DB by Protein ID:ENSP00000390126
Original member Current member NCBI NM_001394494.2 NP_001381423.1 Accepted alive Link to Nucleotide Sequence:NM_001394494.2Link to Protein Sequence:NP_001381423.1Re-query CCDS DB by Nucleotide ID:NM_001394494Re-query CCDS DB by Protein ID:NP_001381423Link to BLAST:NP_001381423.1

Chromosomal Locations for CCDS 94164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102813342 102813531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102822040 102822203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102832840 102832974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102854777 102854860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102877467 102877593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102878331 102878450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102883305 102883467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102883568 102883685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102884214 102884312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102913086 102913215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102926274 102926374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102931881 102931933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102963533 102963665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102968022 102968117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103025063 103025230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103027449 103027558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103028600 103028748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103029351 103029418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103055088 103055178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103055644 103055747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103074696 103074770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGGCCTCGCTACGCAATGCCAACCCGAGGCTGAAGAACTACTTCAAGGAGAACTACATTCCTCAGGTCT
GCGAGGCACTGTTATGTGGTATACTTGTTACATGTCCTGAGGATCCGCTGAGGTATTTAGAGGGAATGAT
CATGGTTATAATCAAAAGTGGTCTTCAGAATCTTCTTTGGGATATGTGCATTACTCCATCAATGAAACCA
AACATTCGAAGATTGTCTGAAACTTACCTGGAACAACTTTTTGAATTGGATGATCAGCTGATGACTCCGG
AATTGATGATAAAAGCCTGTAGCTTTTATACTGGACATTTAGTAAAGACTCATTTTTGCACTTGGAGAGA
CATAGCTCGTACAAATGAAAATGTCGTCCTGGCTGAAAAAATGAACAGAGCAGTGACATGCTACAATTTC
AGACTTCAAAAATCTGTATTTCATCACTGGCACTCTTATATGGAAGACCAGAAAGAAAAACTTAAAAATA
TTCTATTGCGGATACAACAGATCATCTATTGTCACAAGCTAACCATTATCCTAACAAAATGGCGGAATAC
AGCAAGACATAAGAGTAAAAAGAAAGAAGATGAGCTGATATTAAAACATGAACTTCAATTGAAAAAATGG
AAAAATAGGTTAATACTCAAAAGAGCTGCTGCAGAAGAATCCAATTTTCCTGAACGAAGTTCTTCTGAAG
TCTTTCTTGTAGATGAGACTCTAAAATGTGACATTTCACTGTTACCTGAAAGAGCAATATTACAGATTTT
CTTCTACCTCAGTTTAAAAGATGTGATAATATGTGGTCAAGTTAATCATGCCTGGATGTTGATGACACAA
CTAAACTCACTGTGGAATGCTATTGATTTTTCCTCAGTGAAAAATGTGATTCCAGATAAATATATAGTGT
CTACTTTGCAAAGGTGGCGTTTAAATGTGCTGCGTTTGAATTTTCGTGGTTGTCTTCTCCGACCCAAAAC
TTTCAGATCTGTCAGCCACTGTAGGAACTTGCAAGAGTTGAATGTCTCTGACTGCCCAACATTCACAGAT
GAATCAATGAGACACATTTCTGAGGGCTGCCCGGGGGTCCTGTGTCTCAATCTGTCTAACACAACTATCA
CCAACAGGACGATGCGACTCCTGCCGAGGCACTTCCACAACTTACAGAATCTTAGTTTGGCTTATTGCAG
ACGGTTCACAGACAAAGGCTTACAGTACCTGAACTTGGGGAATGGATGCCACAAGCTCATCTATCTGGAC
CTCTCTGGCTGCACCCAGATTTCAGTCCAAGGCTTCAGGTACATTGCAAACAGCTGCACTGGAATTATGC
ATCTTACCATTAATGACATGCCAACTCTGACGGACAACTGTGTAAAAGCTTTAGTTGAAAAATGCTCTCG
TATTACATCGCTGGTTTTCACTGGTGCACCGCATATCTCCGATTGTACTTTCAGAGCTCTTTCTGCTTGT
AAACTCAGAAAGATCCGATTTGAAGGAAATAAAAGGGTTACTGATGCATCCTTCAAATTTATAGACAAGA
ATTATCCAAATCTCAGTCACATTTATATGGCTGACTGCAAGGGAATAACAGACAGCAGCCTCAGATCCCT
TTCACCTTTGAAGCAACTGACTGTGTTGAATTTGGCAAATTGTGTAAGAATTGGTGATATGGGACTAAAG
CAATTTCTTGATGGTCCTGCAAGCATGAGGATAAGAGAGCTAAATTTAAGCAACTGTGTGCGGCTAAGTG
ATGCCTCTGTTATGAAACTATCTGAGCGCTGCCCTAATTTAAACTACTTGAGTTTACGAAATTGTGAACA
TTTGACTGCCCAAGGAATTGGATATATTGTAAACATCTTTTCCTTGGTATCAATAGATCTCTCTGGAACA
GACATCTCTAATGAGGGTTTGAATGTGCTTTCCAGACATAAAAAATTGAAGGAACTTTCTGTATCTGAAT
GTTATAGAATCACTGATGATGGAATTCAGGCATTCTGCAAAAGCTCACTGATCTTGGAACATTTGGATGT
CTCTTATTGCTCCCAGCTGTCAGATATGATTATCAAAGCACTGGCCATTTACTGCATTAACCTCACATCT
CTCAGCATTGCTGGCTGTCCAAAGATTACTGACTCAGCAATGGAGATGTTATCGGCAAAATGCCATTACC
TGCACATTTTGGATATCTCTGGTTGTGTCTTGCTTACTGACCAAATCCTTGAGGACCTTCAGATAGGCTG
CAAACAACTCCGGATCCTTAAGATGCAATACTGCACAAATATTTCCAAGAAGGCAGCTCAAAGAATGTCA
TCTAAAGTTCAGCAGCAGGAATACAACACTAATGACCCTCCACGTTGGTTTGGCTATGATAGGGAAGGAA
ACCCTGTTACAGAGCTTGACAACATAACATCATCTAAAGGAGCCTTAGAATTAACAGTGAAAAAGTCAAC
ATACAGCAGTGAAGACCAAGCAGCGTGA

Translation (825 aa):
MASLRNANPRLKNYFKENYIPQVCEALLCGILVTCPEDPLRYLEGMIMVIIKSGLQNLLWDMCITPSMKP
NIRRLSETYLEQLFELDDQLMTPELMIKACSFYTGHLVKTHFCTWRDIARTNENVVLAEKMNRAVTCYNF
RLQKSVFHHWHSYMEDQKEKLKNILLRIQQIIYCHKLTIILTKWRNTARHKSKKKEDELILKHELQLKKW
KNRLILKRAAAEESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWMLMTQ
LNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLRLNFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTD
ESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLD
LSGCTQISVQGFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSAC
KLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLK
QFLDGPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGT
DISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMIIKALAIYCINLTS
LSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNISKKAAQRMS
SKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGALELTVKKSTYSSEDQAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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