NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94304.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94304.1 Public Homo sapiens 8 CSPP1 24 110 108 CCDS HistoryNCBI Gene:79848Re-query CCDS DB by CCDS ID:94304.1Re-query CCDS DB by GeneID:79848See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94304.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000676882.1 ENSP00000504342.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676882.1Link to Ensembl Protein Viewer:ENSP00000504342.1Re-query CCDS DB by Nucleotide ID:ENST00000676882Re-query CCDS DB by Protein ID:ENSP00000504342
Original member Current member NCBI NM_001364870.1 NP_001351799.1 Accepted alive Link to Nucleotide Sequence:NM_001364870.1Link to Protein Sequence:NP_001351799.1Re-query CCDS DB by Nucleotide ID:NM_001364870Re-query CCDS DB by Protein ID:NP_001351799Link to BLAST:NP_001351799.1

Chromosomal Locations for CCDS 94304.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 67064399 67064496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67074243 67074351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67076482 67076581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67086007 67086110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67093543 67093641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67095293 67095732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67105905 67105975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67111972 67112065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67113805 67113862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67115914 67116122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118248 67118369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118743 67118821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67131951 67132080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67137456 67137603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67149783 67149935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67154024 67154136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158447 67158596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158991 67159137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67161811 67161915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67163732 67163798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67164391 67164508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67172416 67172555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67175296 67175436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67177680 67177726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67179863 67179926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67190650 67190759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67193464 67193602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67195382 67195593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3567 nt):
ATGCTGTTCCCGCTCCAGGTGGCCGCTGTAACCTCTTCGGTCCGCGACGATCCTCTAGAGCACTGTGTGT
CTCCCCGGACGCGAGCCCGCTCCCCTGAAATCTGCAAAATGGCTGATAATTTGGATGAATTTATTGAAGA
GCAAAAAGCCAGATTGGCCGAAGACAAAGCAGAGTTGGAAAGTGATCCACCTTACATGGAAATGAAGGGA
AAGTTGTCAGCGAAGCTTTCTGAAAACAGTAAGATACTGATCTCTATGGCTAAGGAAAACATACCACCAA
ATAGTCAACAGACCAGGGGTTCCTTAGGAATTGATTATGGATTAAGTTTACCACTTGGAGAAGACTATGA
ACGGAAGAAACATAAATTAAAAGAAGAATTGCGGCAAGATTACAGACGTTATCTTACTCAGGAAAGGTTG
AAACTTGAACGTAACAAAGAATACAATCAGTTTCTCAGGGGTAAGGAAGAATCCAGTGAAAAGTTCAGGC
AGGTGGAAAAGAGTACTGAGCCCAAGAGTCAGAGAAATAAAAAACCTATTGGTCAAGTTAAGCCTGATCT
AACTTCACAAATACAGACATCTTGTGAAAATTCAGAGGGTCCTAGAAAAGATGTCTTAACTCCTTCAGAG
GCATATGAAGAACTTCTGAACCAAAGACGACTAGAGGAGGACAGATACCGACAACTAGATGATGAAATCG
AATTAAGGAATAGAAGAATTATTAAAAAAGCAAATGAAGAAGTGGGCATTTCCAACCTAAAACATCAAAG
GTTTGCAAGCAAGGCTGGCATTCCAGATAGAAGATTTCACAGATTTAATGAGGATCGTGTTTTTGATAGA
CGGTATCATAGACCAGACCAAGATCCTGAAGTAAGTGAAGAAATGGATGAGAGGTTTAGATATGAAAGTG
ATTTTGATAGAAGACTTTCGAGAGTGTATACAAATGACAGTGCTCCAGACAATGAAACATCCAAATCTGC
TAATCAAGATACCTGTAGTCCTTTTGCAGGGATGCTCTTTGGAGGTGAAGATCGAGAACTTATTCAGAGA
AGGAAAGAGAAATACAGACTAGAACTGTTGGAACAAATGGCTGAGCAACAGAGGAACAAGAGACGAGAAA
AAGATTTAGAACTCAGGGTTGCAGCGTCTGGAGCACAAGACCCTGAGAAATCGCCTGATAGACTAAAGCA
GTTTAGTGTGGCACCAAGACACTTTGAAGAGATGATACCACCTGAAAGACCCAGAATAGCTTTCCAGACA
CCTCTCCCTCCTTTATCTGCCCCATCTGTCCCACCCATCCCATCAGTTCATCCTGTTCCTTCTCAAAATG
AAGATTTGCGCAGTGGACTCAGCAGCGCCCTTGGTGAAATGGTGTCTCCCAGGATTGCACCTCTGCCTCC
ACCTCCCCTACTACCACCTTTGGCTACTAACTATCGAACTCCTTATGATGATGCATACTATTTTTATGGG
TCCAGGAATACTTTCGATCCCAGTCTTGCTTATTATGGTTCAGGAATGATGGGCGTACAGCCTGCAGCTT
ATGTTAGTGCTCCTGTCACCCACCAACTAGCACAACCTGTTGTGAATACGGTTGGACAGAATGAACTGAA
GATTACAAGTGATCAAGTGATAAATTCAGGATTGATTTTTGAAGATAAACCGAAACCTTCCAAACAGTCA
CTTCAGTCTTACCAAGAGGCTTTGCAGCAGCAGATTCGGGAAAGAGAAGAAAGAAGGAAGAAAGAACGTG
AAGAAAAAGAAGAATATGAAGCTAAATTAGAAGCTGAAATGAGAACATATAATCCCTGGGGAAAAGGTGG
AGGTGGTGCTCCTCTCAGGGATGCAAAAGGAAATCTGATAACTGATTTGAATAGGATGCACAGACAAAAT
ATAGATGCCTACCATAACCCAGATGCAAGAACATATGAAGATAAAAGGGCTGTTGTATCTCTAGACCCAA
ATTTAGCCACTTCAAATGCTGAGAACCTAGAAGATGCTGCAAATAAAAGCTCAGGTCATATGCAAACACA
GAGCTCTCCTTTTGCTCGGGGAAATGTATTTGGTGAGCCTCCAACTGAACTTCAGATTAAACAGCAAGAA
TTATACAAGAATTTTCTTCGTTTCCAGATTGAGGAAAAGAAACAAAGAGAGGAAGCAGAGCGAGAGAGAC
TGAGAATTGCAGAAGAAAAAGAAGAAAGACGGCTTGCAGAACAGAGGGCACGAATTCAGCAGGAGTATGA
AGAGGAACAGGAAAAGAAAAGAGAGAAAGAGGAGGAGCAAAGGCTAAAAAATGAAGAGCATATTCGGTTA
GCTGAAGAAAGACAAAAAGAAGCAGAAAGAAAGAAGAAAGAAGAAGAAGAAAAATATAACCTGCAACTTC
AGCACTACTGTGAAAGAGACAATTTGATTGGGGAAGAAACAAAGCACATGAGACAGCCTTCTCCTATAGT
TCCTGCTCTTCAGAACAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGTTGACAGCATCATACGTTCC
TTTATTCATGAAAGTTCCATGTCCAGGGCACAGTCACCCCCGGTACCTGCCAGGAAAAATCAGCTCCGTG
CAGAAGAGGAGAAAAAAAATGTAATTATGGAATTATCAGAAATGAGAAAACAGCTTCGTAGTGAAGAGAG
GCGTCTACAAGAGCGATTGCTACACATGGACAGTGATGATGAAATTCCTATCAGGAAAAAGGAAAGGAAT
CCCATGGATATATTTGATATGGCTAGACATCGGTTGCAAGCTCCTGTCAGAAGACAGTCCCCTAAGGGCT
TAGACGCTGCCACTTTTCAGAATGTTCATGATTTTAATGAGCTGAAAGATAGAGATTCAGAAACACGAGT
TGATCTGAAATTTATGTACCTGGATCCTCCAAGAGATCATCACACCTTAGAGATTCAGCAGCAAGCCCTG
CTAAGAGAGCAGCAGAAGAGGCTGAACAGAATAAAAATGCAGGAAGGTGCCAAAGTTGACTTAGATGCCA
TCCCAAGTGCTAAAGTACGAGAGCAAAGAATGCCCAGAGATGACACTAGTGATTTCTTGAAAAACTCATT
ATTGGAATCTGATAGTGCTTTTATTGGGGCTTACGGTGAGACATATCCTGCCATTGAAGATGACGTCCTC
CCTCCACCATCACAGTTGCCCTCTGCACGGGAGCGCAGGAGGAACAAATGGAAAGGACTAGACATTGATA
GCAGTCGTCCTAATGTAGCACCAGATGGTCTCTCTCTAAAATCTATATCCAGTGTAAATGTTGATGAGCT
TAGAGTGAGAAATGAGGAACGAATGCGAAGACTGAATGAATTTCACAATAAACCTATTAATACAGATGAT
GAGAGTTCACTGGTTGACCCTGATGACATCATGAAACACATAGGGGATGACGGATCAAACTCTGTAGCAA
CTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAACGCTGAAACGTTTCATGGCAGAGCAGCTGAACCAGGA
GCAGCAGCAGATTCCTGGAAAACCAGGCACTTTCACTTGGCAGGGCCTGTCGACTGCACATGGTTAA

Translation (1188 aa):
MLFPLQVAAVTSSVRDDPLEHCVSPRTRARSPEICKMADNLDEFIEEQKARLAEDKAELESDPPYMEMKG
KLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDYGLSLPLGEDYERKKHKLKEELRQDYRRYLTQERL
KLERNKEYNQFLRGKEESSEKFRQVEKSTEPKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDVLTPSE
AYEELLNQRRLEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIPDRRFHRFNEDRVFDR
RYHRPDQDPEVSEEMDERFRYESDFDRRLSRVYTNDSAPDNETSKSANQDTCSPFAGMLFGGEDRELIQR
RKEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSPDRLKQFSVAPRHFEEMIPPERPRIAFQT
PLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEMVSPRIAPLPPPPLLPPLATNYRTPYDDAYYFYG
SRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPVVNTVGQNELKITSDQVINSGLIFEDKPKPSKQS
LQSYQEALQQQIREREERRKKEREEKEEYEAKLEAEMRTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQN
IDAYHNPDARTYEDKRAVVSLDPNLATSNAENLEDAANKSSGHMQTQSSPFARGNVFGEPPTELQIKQQE
LYKNFLRFQIEEKKQREEAERERLRIAEEKEERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRL
AEERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRPPSVDSIIRS
FIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQERLLHMDSDDEIPIRKKERN
PMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNELKDRDSETRVDLKFMYLDPPRDHHTLEIQQQAL
LREQQKRLNRIKMQEGAKVDLDAIPSAKVREQRMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVL
PPPSQLPSARERRRNKWKGLDIDSSRPNVAPDGLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDD
ESSLVDPDDIMKHIGDDGSNSVATEPWLRPGTSETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH