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Report for CCDS94330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94330.1 Public Homo sapiens 8 RIMS2 24 110 108 CCDS HistoryNCBI Gene:9699Re-query CCDS DB by CCDS ID:94330.1Re-query CCDS DB by GeneID:9699See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000705949.1 ENSP00000516186.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000705949.1Link to Ensembl Protein Viewer:ENSP00000516186.1Re-query CCDS DB by Nucleotide ID:ENST00000705949Re-query CCDS DB by Protein ID:ENSP00000516186
Original member Current member NCBI NM_001348500.2 NP_001335429.1 Accepted alive Link to Nucleotide Sequence:NM_001348500.2Link to Protein Sequence:NP_001335429.1Re-query CCDS DB by Nucleotide ID:NM_001348500Re-query CCDS DB by Protein ID:NP_001335429Link to BLAST:NP_001335429.1

Chromosomal Locations for CCDS 94330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 103819508 103819629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103885298 103886223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103910134 103910201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103912053 103912172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103915495 103915594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103916414 103916537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103918441 103918487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103921672 103921784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103931263 103931393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103936551 103936722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103942773 103942926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103961065 103961133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103975350 103975506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103989305 103989421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103998185 103998250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104014506 104014615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104244916 104245057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104248701 104248813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104249487 104249588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104251024 104251163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104251602 104251820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3312 nt):
ATGCAATTTGAGACATTGCGCCAGGTCTGCAATTCTGTTTTATCTCATTTTCATGGGGTTTTTTCATCCC
CACCAAATATCTTACAAAATGAGCTTTTTGGACAAACACTGAACAATGCAAGGAAAAGAAGCCCATCTGT
GTCCAGAGATCAGAATAGAAGATACGACCAAAGGGAAGAAAGAGAGGAATATTCACAGTATGCTACTTCG
GATACCGCAATGCCTAGATCTCCATCAGATTATGCTGATAGGCGATCTCAACATGAACCTCAGTTTTATG
AAGACTCTGATCATTTAAGTTATAGGGACTCCAACAGGAGAAGTCATAGGCATTCCAAAGAATATATTGT
AGATGATGAGGATGTGGAAAGCAGAGATGAATACGAAAGGCAAAGGAGAGAGGAAGAGTACCAGTCACGC
TACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCC
ATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGGCAAATGCTGATCTGGA
AGATTCCAGGATTTCTATGCTAAGGATGGATCGACCATCAAGGCAAAGATCTATATCAGAACGTAGAGCT
GCCATGGAAAATCAGCGATCTTATTCAATGGAAAGAACTCGAGAGGCTCAGGGACCAAGTTCTTATGCAC
AAAGGACCACAAACCATAGTCCTCCTACCCCCAGGAGGAGTCCACTACCCATAGATAGACCAGACTTGAG
GCGTACTGACTCACTACGGAAACAGCACCACTTAGATCCTAGCTCTGCTGTAAGAAAAACAAAACGGGAA
AAAATGGAAACAATGTTAAGGAATGATTCTCTCAGTTCAGACCAGTCAGAGTCAGTGAGACCTCCACCAC
CAAAGCCTCATAAATCAAAGAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAATT
GGCTTCCACGCCTGAATATACAAGTTGTGATGATGTTGAGATTGAAAGTGAGAGTGTAAGTGAAAAAGGA
GACATGGATTACAACTGGTTGGATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTGCACC
CTGTAACCTGGCAACCATCTAAAGATGGAGATCGTTTAATTGGTCGCATTTTATTAAATAAGCGTCTAAA
AGATGGAAGTGTACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGGTTGTAGGAGGAAAGATGACTGAA
TCAGGTCGGCTTTGTGCATTTATTACTAAAGTAAAAAAAGGAAGTTTAGCTGATACTGTAGGACATCTTA
GACCAGGTGATGAAGTATTAGAATGGAATGGAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGTACAA
CATCATTCTAGAATCCAAACCTGAACCACAAGTAGAACTTGTAGTTTCAAGGCCTATTGGAGATATACCG
CGAATACCTGATAGCACACATGCACAACTGGAGTCCAGTTCTAGCTCCTTTGAATCTCAAAAAATGGATC
GTCCTTCTATTTCTGTTACCTCTCCCATGAGTCCTGGAATGTTGAGGGATGTCCCACAGTTCTTATCAGG
ACAACTTTCAATAAAACTATGGTTTGACAAGGTTGGTCACCAATTAATAGTTACAATTTTGGGAGCAAAA
GATCTCCCTTCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTTAAAATTTACTTTCTTCCAGACAGAA
GTGATAAAAACAAGAGAAGAACTAAAACAGTAAAGAAAACATTGGAACCCAAATGGAACCAAACATTCAT
TTATTCTCCAGTCCACCGAAGAGAATTTCGGGAACGAATGCTAGAGATTACCCTTTGGGATCAAGCTCGT
GTTCGAGAGGAAGAAAGTGAATTCTTAGGCGAGATTTTAATTGAATTAGAAACAGCATTATTAGATGATG
AGCCACATTGGTACAAACTTCAGACGCATGATGTCTCTTCATTGCCACTTCCCCACCCTTCTCCATATAT
GCCACGAAGACAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGATAGT
GAAGTCTCTGACTATGACTGTGATGATGGAATTGGTGTAGTATCAGATTATCGACATGATGGTCGAGATC
TTCAAAGCTCAACATTATCAGTGCCAGAACAAGTAATGTCATCAAACCACTGTTCACCATCAGGGTCTCC
TCATCGAGTAGATGTTATAGGAAGGACTAGATCATGGTCACCCAGTGTCCCTCCTCCACAAAGTCGGAAT
GTGGAACAGGGGCTTCGAGGGACCCGCACTATGACCGGACATTATAATACAATTAGCCGAATGGACAGAC
ATCGTGTCATGGATGACCATTATTCTCCAGATAGAGACAGTCATTTTCTTACTCTACCTCGCTCCAGATA
CAGTCAGACCATTGACCATCATCACAGGGATGGCAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGC
CCATCAAGTACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGG
ATAGAAAAGCAGGAGGTAAAAAACTAAGGAGCACTGTCCAAAGAAGTACAGAAACAGGCCTGGCCGTGGA
AATGAGGAACTGGATGACTCGACAGGCAAGCCGAGAGTCTACAGATGGTAGCATGAACAGCTACAGCTCA
GAAGGAAATCTGATTTTCCCTGGTGTTCGCTTGGCCTCTGATAGCCAGTTCAGTGATTTCCTGGATGGCC
TTGGCCCTGCTCAGCTAGTGGGACGCCAGACTCTGGCAACACCTGCAATGGGTGACATTCAGGTAGGAAT
GATGGACAAAAAGGGACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCCTTGTTGTAAAACCAGGTTCC
AAGACACTGCCAGCACCGTATGTAAAAGTGTATCTATTAGATAACGGAGTCTGCATAGCCAAAAAGAAAA
CAAAAGTGGCAAGAAAAACGCTGGAACCCCTTTACCAGCAGCTATTATCTTTCGAAGAGAGTCCACAAGG
AAAAGTTTTACAGATCATCGTCTGGGGAGATTATGGCCGCATGGATCACAAATCTTTTATGGGAGTGGCC
CAGATACTTTTAGATGAACTAGAGCTATCCAATATGGTGATCGGATGGTTCAAACTTTTCCCACCTTCCT
CCCTAGTAGATCCAACCTTGGCCCCTCTGACAAGAAGAGCTTCCCAATCATCTCTGGAAAGTTCAACTGG
ACCTTCTTACTCTCGTTCATAG

Translation (1103 aa):
MQFETLRQVCNSVLSHFHGVFSSPPNILQNELFGQTLNNARKRSPSVSRDQNRRYDQREEREEYSQYATS
DTAMPRSPSDYADRRSQHEPQFYEDSDHLSYRDSNRRSHRHSKEYIVDDEDVESRDEYERQRREEEYQSR
YRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHSDVSLANADLEDSRISMLRMDRPSRQRSISERRA
AMENQRSYSMERTREAQGPSSYAQRTTNHSPPTPRRSPLPIDRPDLRRTDSLRKQHHLDPSSAVRKTKRE
KMETMLRNDSLSSDQSESVRPPPPKPHKSKKGGKMRQISLSSSEEELASTPEYTSCDDVEIESESVSEKG
DMDYNWLDHTSWHSSEASPMSLHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTE
SGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDIP
RIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSIKLWFDKVGHQLIVTILGAK
DLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR
VREEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYMPRRQLHGESPTRRLQRSKRISDS
EVSDYDCDDGIGVVSDYRHDGRDLQSSTLSVPEQVMSSNHCSPSGSPHRVDVIGRTRSWSPSVPPPQSRN
VEQGLRGTRTMTGHYNTISRMDRHRVMDDHYSPDRDSHFLTLPRSRYSQTIDHHHRDGRSHPRTGSVQTS
PSSTPVAGRRGRQLPQLPPKGTLDRKAGGKKLRSTVQRSTETGLAVEMRNWMTRQASRESTDGSMNSYSS
EGNLIFPGVRLASDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQVGMMDKKGQLEVEIIRARGLVVKPGS
KTLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPLYQQLLSFEESPQGKVLQIIVWGDYGRMDHKSFMGVA
QILLDELELSNMVIGWFKLFPPSSLVDPTLAPLTRRASQSSLESSTGPSYSRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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