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Report for CCDS94343.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94343.1 Public Homo sapiens 8 TMEM71 24 110 108 CCDS HistoryNCBI Gene:137835Re-query CCDS DB by CCDS ID:94343.1Re-query CCDS DB by GeneID:137835See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94343.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000677595.1 ENSP00000504388.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000677595.1Link to Ensembl Protein Viewer:ENSP00000504388.1Re-query CCDS DB by Nucleotide ID:ENST00000677595Re-query CCDS DB by Protein ID:ENSP00000504388
Original member Current member NCBI NM_001382403.1 NP_001369332.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382403.1Link to Protein Sequence:NP_001369332.1Re-query CCDS DB by Nucleotide ID:NM_001382403Re-query CCDS DB by Protein ID:NP_001369332Link to BLAST:NP_001369332.1
Original member Current member NCBI NM_001382404.1 NP_001369333.1 Accepted alive Link to Nucleotide Sequence:NM_001382404.1Link to Protein Sequence:NP_001369333.1Re-query CCDS DB by Nucleotide ID:NM_001382404Re-query CCDS DB by Protein ID:NP_001369333Link to BLAST:NP_001369333.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369332.1 295 Q6P5X7-1 295 100% 0 0
NP_001369333.1 295 Q6P5X7-1 295 100% 0 0

Chromosomal Locations for CCDS 94343.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 132710967 132710982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132713995 132714052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132714154 132714215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132722040 132722115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132727798 132727986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132746942 132747114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132751785 132751997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132757234 132757294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132758840 132758879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGTACCGAATATCTCAACTGATGTCAACACCAGTAGCAAGTTCTTCCAGGTTGGAAAGAGAATATGCTG
GAGAGCTGTCTCCCACGTGCATTTTCCCAAGTTTCACCTGTGATTCCCTGGATGGTTACCATTCTTTTGA
ATGCGGCTCCATAGATCCCCTGACAGGCTCCCACTATACCTGTCGCCGAAGTCCCAGACTCCTCACCAAT
GGCTACTATATTTGGACTGAAGACAGCTTCCTGTGCGACAAAGATGGCAACATAACTCTGAACCCATCCC
AGACCAGCGTTATGTATAAGGAGAACTTAGTTAGGATATTTAGAAAGAAAAAGAGAATCTGCCATTCCTT
TTCTTCTCTCTTCAACCTCAGTACCTCCAAATCTTGGCTGCATGGAAGTATCTTTGGTGACATCAACTCT
TCTCCAAGTGAAGACAACTGGTTGAAGGGGACCAGGAGGTTGGACACAGACCATTGCAATGGAAATGCAG
ATGATTTAGACTGTTCTTCTCTGACTGATGACTGGGAGTCAGGGAAGATGAATGCAGAGTCTGTGATCAC
CTCCTCTTCCAGCCACATCATATCTCAGCCTCCTGGAGGAAACTCCCATAGCTTGTCTCTTCAGTCCCAG
TTGACAGCTTCTGAACGTTTCCAAGAGAATAGTTCGGATCATTCAGAAACCAGGTTGTTGCAAGAGGTCT
TCTTTCAGGCAATCCTGCTTGCTGTGTGCTTAATCATTTCTGCATGTGCAAGATGGTTTATGGGAGAAAT
ATTAGCCAGTGTCTTCACATGCTCATTGATGATAACTGTAGCTTATGTGAAATCATTGTTTCTCAGCCTT
GCCAGCTATTTCAAAACCACTGCCTGTGCTCGGTTTGTCAAAATTTGA

Translation (295 aa):
MYRISQLMSTPVASSSRLEREYAGELSPTCIFPSFTCDSLDGYHSFECGSIDPLTGSHYTCRRSPRLLTN
GYYIWTEDSFLCDKDGNITLNPSQTSVMYKENLVRIFRKKKRICHSFSSLFNLSTSKSWLHGSIFGDINS
SPSEDNWLKGTRRLDTDHCNGNADDLDCSSLTDDWESGKMNAESVITSSSSHIISQPPGGNSHSLSLQSQ
LTASERFQENSSDHSETRLLQEVFFQAILLAVCLIISACARWFMGEILASVFTCSLMITVAYVKSLFLSL
ASYFKTTACARFVKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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