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Report for CCDS94435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94435.1 Public Homo sapiens 9 SPATA31C2 24 110 108 CCDS HistoryNCBI Gene:645961Re-query CCDS DB by CCDS ID:94435.1Re-query CCDS DB by GeneID:645961See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94435.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000675441.1 ENSP00000509164.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675441.1Link to Ensembl Protein Viewer:ENSP00000509164.1Re-query CCDS DB by Nucleotide ID:ENST00000675441Re-query CCDS DB by Protein ID:ENSP00000509164
Original member Current member NCBI NM_001166137.1 NP_001159609.1 Accepted alive Link to Nucleotide Sequence:NM_001166137.1Link to Protein Sequence:NP_001159609.1Re-query CCDS DB by Nucleotide ID:NM_001166137Re-query CCDS DB by Protein ID:NP_001159609Link to BLAST:NP_001159609.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159609.1 1134 B4DYI2 1134 100% 0 0

Chromosomal Locations for CCDS 94435.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 88129632 88132710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 88132966 88133026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 88133594 88133669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 88134768 88134956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3405 nt):
ATGGAGAATCTTCCCTTTCCTCTAAAATTACTTAGTGCCTCATCACTAAACACCCCCAGCTCCACACCAT
GGGTGTTGGATATCTTCCTCACCTTGGTGTTTGCCCTGGGGTTCTTCTTCCTATTACTCCCCTACTTCTC
TTACCTCCGTTGTGACAACCCACCCTCACCATCGCCTAAGAAGAGAAAGCGTCATCTTGTCTCCCAGCGT
CCAGCAGGGCGGAGGGGGAGGCCCAGAGGCAGGATGAAAAACCACAGTCTGAGAGCTTGTAGAGAGTGCC
CGAGAGGCCTGGAGGAGACTTGGGACCTGCTTTCACAACTGCAGAGCCTCCTGGGGCCACACCTTGAAAA
AGGTGACTTTGGTCAGCTCTCTGGTCCAGACCCGCCAGGTGAGGTGGGCAAAAGAACACCTGATGGAGCC
TCCCGGTCCTCTCATGAGCCTACGGAAGACGCTGCTCCCATTGTCTCCCCGTTAGCTTCCCCGGATCCTC
GAACCAAGCATCCTCAGGATCTGGCCTCCACCCCACCACCAGGCCCAATGACCACCTCAGTCTCCTCCCT
AAGTGCCTCCCAGCCACCAGAACCTTCCCTTCTCCTAGAACATCCCTCACCCGAGCCACCTGCACTTTTC
CCTCACCCACCACGCACTCCTGATCCTCTGGCCTGCTCTCCGCCTCCTCCGAAAGGCTTCACTCCTCCTC
CCCTGCGGGACTCCACTCTGTTAACACCATCTCACTGTGACTCAGTGGCACTTCCACTGGACACCGTCCC
TCAAAGCTTGTCTCCACGTGAGGATTTGGCGGCTTCTGTCCCAGGCATCTCAGGCCTTGGCGGCTCAAAC
AGTCAAGTTTCTGCCCTCTCCTGGTCGCAGGAGACTACCAAAACCTGGTGCGTCTTCAACTCGTCAGTCC
AGCAAGATCATCTTTCCCGCCAAAGGGACACTACAATGTCCCCACTGCTTTTCCAGGCCCAGCCCCTGTC
CCATCTGGAGCCTGAGTCCCAACCCTTTATTTCATCCACACCCCAATTCTGGCCCACACCTATGGCTCAG
GCCGAGGCTCAGGCCCATCTTCAATCCTCTTTCCCAGTCCTATCTCCTGCTTTTCTATCCCCGATGAAGA
ACACTGGAGTAGCTTGCCCTGCGTCGCAGAATAAAGTGCAAGCTCTCTCCCTACCTGAAACTCAGCACCC
TGAAAGGCCTTTGTTGAAGAAACAACTAGAAGGTGGGTTGGCTTTACCCTCTAGGGTCCAAAAATCTCAG
GACGTCTTTAGTGTCTCCACTCCTAACCTTCCCCAGGAAAGACTGACATCCATTCTGCCTGAGAACTTTC
CAGTCAGTCCTGAACTCTGGAGACAACTGGAGCAACACATGGGGCAACGTGGAAGGATCCAAGAGTCTCT
GGATCTGATGCAGCTTCAGGATGAATTGCCAGGGACAAGTCAGGCCAAGGGCAAACCCAGGCCCTGGCAG
TCCTCCACGTCCACAGGTGAAAGCAGCAAGGAGGCACAGACGGTGAAGTTCCAGCTAGAGAGGGACCCAT
GCCCACATCTGGGGCAAATTCTGGGTGAGACCCCACAAAATCTATCCAGGGGCATGGAAAGCTTCCCAGG
GAAGGTTCTGGGGGCGACCTCTGAGGAGTCGGAAAGGAACCTGAGGAAGCCCTTGAGGAGTGACTCAGGA
AGTGATTTATTAAGACGCACAGAGAGGAATCATATAGAAAACATCCTGAAAGCCCACATGAGCAGAAAGT
TGGGCCAGACCAACGAGGGCTTGATCCCCGTGAGTGTGCGTCGATCCTGGCTTGCTGTCAACCAGGCTTT
TCCCGTCTCCAACACCCACGTGAAAACCAGCAATCTAGCAGCCCCGAAAAGCAGGAAAGCCTGTGTGAAC
ACAGCCCAGGTGCTTTCCTTCCTTGAGCCGTGTACTCAGCAGGTGCTGGGAGCCCATATTGTGAGGTTTT
GGGCCAAACACAGGTGGGGTCTACCCCTCAGGGTCCTCAAGCCCATTCAGTGCTTTCAACTGGAAAAGGT
TTCATCCTTGTCCCTTATACAGCTTGCTGGTCCCTCCTCAGACACCTGCGAATCTGGGGCTGGCTCAAAA
GTTGAGGTGGCCACGTTCCTTGGAGAGCCACCAATGGCAAGTCTGAGAAAGCAGGTGCTGACCAAACCAT
CTGTTCACATGCCAGAGAGGCTTCAGGCCTCCTCACCTGCATGTAAGCAGTTCCAGAGGGCCCCGCGAGG
GATCCCATCTTCGAATGATCATGGGTCCTTGAAGGCTCCTACAGCTGGACAGGAGGGCAGGTGGCCATCT
AAGCCCCTCACATACAGCCTCACAGGCAGCACCCAGCAGAGCAGGAGCTTAGGAGCCCAATCTTCAAGGG
CTGGAGAGACCAGGGAGGCAGTGCCACAACCCACAGTCCCCTTGGGAACCTGTATGAGAGCAAACCTCCA
AGCCACAAGTGAGGATGTGCGTGGTTTCAAGGCTCCAGGCGCCAGCAAAAGCTCTCTACTCCCTAGAATG
TCTGTCTCCCAAGACCCAAGAAAGCTGTGTCTCATGGAGGAGGCTGTTAGTGAATTTGAGCCTGGAAAGG
CCACGAAGTCAGAGACCCAGCCTCAAGTTTCTGCCACTGTTGTGCTCCTTCCAGATGGGCAAGCATCTGT
TGTGCCCCATGCTTCAGAGAATTTGGCTTCTCAAGTGCCCCAGGGCCATCTCCAGAGCATGCCTACTGGG
AACATGCAGGCTTCCCAGGAGCTATGTGACCTCATGTCAGCCAGAAGGAGTAACATGGGGCACAAGGAGC
CCAGGAACCCAAACTGTCAAGGCTCATGCAAGAGCCAAAGCCCAATGTTTCCCCCTACTCACAAGAGGGA
GAACTCTAGGAAGCCCAACTTAGAAAAACATGAAGAAATGTTTCAAGGATTGAGGACTCCTCAACTTACC
CCAGGCAGGAAAACAGAAGACACCCGTCAGAATGAAGGCGTCCAGCTACTGCCATCAAAGAAACAGCCTC
CTTCAATAAGCCACTTTGGAGAAAACATCAAGCAATTTTTTCAGACGATTTTTTCAAAGAAAGAAAGGAA
GCCAGCACCAGTCACTGCTGAGAGCCAAAAAACAGTAAAAAACAGATCATGCGTGTACGGCAGCAGTGCT
GAAGCTGAGAGGCTCATGACAGCAGTTGGACAGATACTGGAGGAGAACATGTCACTTTGCCATGCGCGCC
ATGCCTCGAAGGTAAATCAGCAAAGACAGCAGTTTCAAGCCCCAGTCTGTGGGTTTCCCTGCAACCACAG
ACACCCGTTCTACTCAGAACACAGCAGAATGCTGAGCTATGCAGCCAGCAGTCAACAAGCCACTCTCAAG
AACCAGAGTCGTCCCAACAGAGACAGACAAATCAGAGATCAGTAG

Translation (1134 aa):
MENLPFPLKLLSASSLNTPSSTPWVLDIFLTLVFALGFFFLLLPYFSYLRCDNPPSPSPKKRKRHLVSQR
PAGRRGRPRGRMKNHSLRACRECPRGLEETWDLLSQLQSLLGPHLEKGDFGQLSGPDPPGEVGKRTPDGA
SRSSHEPTEDAAPIVSPLASPDPRTKHPQDLASTPPPGPMTTSVSSLSASQPPEPSLLLEHPSPEPPALF
PHPPRTPDPLACSPPPPKGFTPPPLRDSTLLTPSHCDSVALPLDTVPQSLSPREDLAASVPGISGLGGSN
SQVSALSWSQETTKTWCVFNSSVQQDHLSRQRDTTMSPLLFQAQPLSHLEPESQPFISSTPQFWPTPMAQ
AEAQAHLQSSFPVLSPAFLSPMKNTGVACPASQNKVQALSLPETQHPERPLLKKQLEGGLALPSRVQKSQ
DVFSVSTPNLPQERLTSILPENFPVSPELWRQLEQHMGQRGRIQESLDLMQLQDELPGTSQAKGKPRPWQ
SSTSTGESSKEAQTVKFQLERDPCPHLGQILGETPQNLSRGMESFPGKVLGATSEESERNLRKPLRSDSG
SDLLRRTERNHIENILKAHMSRKLGQTNEGLIPVSVRRSWLAVNQAFPVSNTHVKTSNLAAPKSRKACVN
TAQVLSFLEPCTQQVLGAHIVRFWAKHRWGLPLRVLKPIQCFQLEKVSSLSLIQLAGPSSDTCESGAGSK
VEVATFLGEPPMASLRKQVLTKPSVHMPERLQASSPACKQFQRAPRGIPSSNDHGSLKAPTAGQEGRWPS
KPLTYSLTGSTQQSRSLGAQSSRAGETREAVPQPTVPLGTCMRANLQATSEDVRGFKAPGASKSSLLPRM
SVSQDPRKLCLMEEAVSEFEPGKATKSETQPQVSATVVLLPDGQASVVPHASENLASQVPQGHLQSMPTG
NMQASQELCDLMSARRSNMGHKEPRNPNCQGSCKSQSPMFPPTHKRENSRKPNLEKHEEMFQGLRTPQLT
PGRKTEDTRQNEGVQLLPSKKQPPSISHFGENIKQFFQTIFSKKERKPAPVTAESQKTVKNRSCVYGSSA
EAERLMTAVGQILEENMSLCHARHASKVNQQRQQFQAPVCGFPCNHRHPFYSEHSRMLSYAASSQQATLK
NQSRPNRDRQIRDQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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