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Report for CCDS94451.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94451.1 Public Homo sapiens 9 ELP1 24 110 108 CCDS HistoryNCBI Gene:8518Re-query CCDS DB by CCDS ID:94451.1Re-query CCDS DB by GeneID:8518See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94451.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000674948.1 ENSP00000501602.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674948.1Link to Ensembl Protein Viewer:ENSP00000501602.1Re-query CCDS DB by Nucleotide ID:ENST00000674948Re-query CCDS DB by Protein ID:ENSP00000501602
Original member Current member EBI ENST00000674938.1 ENSP00000502427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674938.1Link to Ensembl Protein Viewer:ENSP00000502427.1Re-query CCDS DB by Nucleotide ID:ENST00000674938Re-query CCDS DB by Protein ID:ENSP00000502427
Original member Current member NCBI NM_001318360.2 NP_001305289.1 Accepted alive Link to Nucleotide Sequence:NM_001318360.2Link to Protein Sequence:NP_001305289.1Re-query CCDS DB by Nucleotide ID:NM_001318360Re-query CCDS DB by Protein ID:NP_001305289Link to BLAST:NP_001305289.1

Chromosomal Locations for CCDS 94451.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108869115 108869182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108874895 108874970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108877995 108878149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108878623 108878750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108879446 108879557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108880052 108880165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108881705 108881765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108882125 108882187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108889332 108889393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108891203 108891404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108892986 108893083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108893943 108894066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108896496 108896644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108896953 108897038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108897148 108897285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108898502 108898581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108898671 108898749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108899822 108899895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108900260 108900375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108901425 108901530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108901628 108901681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108902839 108902942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108903563 108903669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108906303 108906485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108908305 108908404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108911010 108911180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108912264 108912494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108916204 108916297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108917547 108917670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108918811 108918901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108919253 108919349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108922842 108922927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108926523 108926603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108927372 108927414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3657 nt):
ATGAGTTGGAGTCCTGACCAAGAGCTGGTGCTTCTTGCCACAGGTCAACAGACCCTGATTATGATGACAA
AAGATTTTGAGCCAATCCTGGAGCAGCAGATCCATCAGGATGATTTTGGTGAAAGCAAGTTTATCACTGT
TGGATGGGGTAGGAAGGAGACACAGTTCCATGGATCAGAAGGCAGACAAGCAGCTTTTCAGATGCAAATG
CATGAGTCTGCTTTGCCCTGGGATGACCATAGACCACAAGTTACCTGGCGGGGGGATGGACAGTTTTTTG
CTGTGAGTGTTGTTTGCCCAGAAACAGGGGCTCGGAAGGTCAGAGTGTGGAACCGAGAGTTTGCTTTGCA
GTCAACCAGTGAGCCTGTGGCAGGACTGGGACCAGCCCTGGCTTGGAAACCCTCAGGCAGTTTGATTGCA
TCTACACAAGATAAACCCAACCAGCAGGATATTGTGTTTTTTGAGAAAAATGGACTCCTTCATGGACACT
TTACACTTCCCTTCCTTAAAGATGAGGTTAAGGTAAATGACTTGCTCTGGAATGCAGATTCCTCTGTGCT
TGCAGTCTGGCTGGAAGACCTTCAGAGAGAAGAAAGCTCCATTCCGAAAACCTGTGTTCAGCTCTGGACT
GTTGGAAACTATCACTGGTATCTCAAGCAAAGTTTATCCTTCAGCACCTGTGGGAAGAGCAAGATTGTGT
CTCTGATGTGGGACCCTGTGACCCCATACCGGCTGCATGTTCTCTGTCAGGGCTGGCATTACCTCGCCTA
TGATTGGCACTGGACGACTGACCGGAGCGTGGGAGATAATTCAAGTGACTTGTCCAATGTGGCTGTCATT
GATGGAAACAGGGTGTTGGTGACAGTCTTCCGGCAGACTGTGGTTCCGCCTCCCATGTGCACCTACCAAC
TGCTGTTCCCACACCCTGTGAATCAAGTCACATTCTTAGCACACCCTCAAAAGAGTAATGACCTTGCTGT
TCTAGATGCCAGTAACCAGATTTCTGTTTATAAATGTGGTGATTGTCCAAGTGCTGACCCTACAGTGAAA
CTGGGAGCTGTGGGTGGAAGTGGATTTAAAGTTTGCCTTAGAACTCCTCATTTGGAAAAGAGATACAAAA
TCCAGTTTGAGAATAATGAAGATCAAGATGTAAACCCGCTGAAACTAGGCCTTCTCACTTGGATTGAAGA
AGACGTCTTCCTGGCTGTAAGCCACAGTGAGTTCAGCCCCCGGTCTGTCATTCACCATTTGACTGCAGCT
TCTTCTGAGATGGATGAAGAGCATGGACAGCTCAATGTCAGTTCATCTGCAGCGGTGGATGGGGTCATAA
TCAGTCTATGTTGCAATTCCAAGACCAAGTCAGTAGTATTACAGCTGGCTGATGGCCAGATATTTAAGTA
CCTTTGGGAGTCACCTTCTCTGGCTATTAAACCATGGAAGAACTCTGGTGGATTTCCTGTTCGGTTTCCT
TATCCATGCACCCAGACCGAATTGGCCATGATTGGAGAAGAGGAATGTGTCCTTGGTCTGACTGACAGGT
GTCGCTTTTTCATCAATGACATTGAGGTTGCGTCAAATATCACGTCATTTGCAGTATATGATGAGTTTTT
ATTGTTGACAACCCATTCCCATACCTGCCAGTGTTTTTGCCTGAGGGATGCTTCATTTAAAACATTACAG
GCCGGCCTGAGCAGCAATCATGTGTCCCATGGGGAAGTTCTGCGGAAAGTGGAGAGGGGTTCACGGATTG
TCACTGTTGTGCCCCAGGACACAAAGCTTGTATTACAGATGCCAAGGGGAAACTTAGAAGTTGTTCATCA
TCGAGCCCTGGTTTTAGCTCAGATTCGGAAGTGGTTGGACAAACTTATGTTTAAAGAGGCATTTGAATGC
ATGAGAAAGCTGAGAATCAATCTCAATCTGATTTATGATCATAACCCTAAGGTGTTTCTTGGAAATGTGG
AAACCTTCATTAAACAGATAGATTCTGTGAATCATATTAACTTGTTTTTTACAGAATTGAAAGAAGAAGA
TGTCACGAAGACCATGTACCCTGCACCAGTTACCAGCAGTGTCTACCTGTCCAGGGATCCTGACGGGAAT
AAAATAGACCTTGTCTGCGATGCTATGAGAGCAGTCATGGAGAGCATAAATCCTCATAAATACTGCCTAT
CCATACTTACATCTCATGTAAAGAAGACAACCCCAGAACTGGAAATTGTACTGCAAAAAGTACACGAGCT
TCAAGGAAATGCTCCCTCTGATCCTGATGCTGTGAGTGCTGAAGAGGCCTTGAAATATTTGCTGCATCTG
GTAGATGTTAATGAATTATATGATCATTCTCTTGGCACCTATGACTTTGATTTGGTCCTCATGGTAGCTG
AGAAGTCACAGAAGGATCCCAAAGAATATCTTCCATTTCTTAATACACTTAAGAAAATGGAAACTAATTA
TCAGCGGTTTACTATAGACAAATACTTGAAACGATATGAAAAAGCCATTGGCCACCTCAGCAAATGTGGA
CCTGAGTACTTCCCAGAATGCTTAAACTTGATAAAAGATAAAAACTTGTATAACGAAGCTCTGAAGTTAT
ATTCACCAAGCTCACAACAGTACCAGGATATCAGCATTGCTTATGGGGAGCACCTGATGCAGGAGCACAT
GTATGAGCCAGCGGGGCTCATGTTTGCCCGTTGCGGTGCCCACGAGAAAGCTCTCTCAGCCTTTCTGACA
TGTGGCAACTGGAAGCAAGCCCTCTGTGTGGCAGCCCAGCTTAACTTTACCAAAGACCAGCTGGTGGGCC
TCGGCAGAACTCTGGCAGGAAAGCTGGTTGAGCAGAGGAAGCACATTGATGCGGCCATGGTTTTGGAAGA
GTGTGCCCAGGATTATGAAGAAGCTGTGCTCTTGCTGTTAGAAGGAGCTGCCTGGGAAGAAGCTTTGAGG
CTGGTATACAAATATAACAGACTGGATATTATAGAAACCAACGTAAAGCCTTCCATTTTAGAAGCCCAGA
AAAATTATATGGCATTTCTGGACTCTCAGACAGCCACATTCAGTCGCCACAAGAAACGTTTATTGGTAGT
TCGAGAGCTCAAGGAGCAAGCCCAGCAGGCAGGTCTGGATGATGAGGTACCCCACGGGCAAGAGTCAGAC
CTCTTCTCTGAAACTAGCAGTGTCGTGAGTGGCAGTGAGATGAGTGGCAAATACTCCCATAGTAACTCCA
GGATATCAGCGAGATCATCCAAGAATCGCCGAAAAGCGGAGCGGAAGAAGCACAGCCTCAAAGAAGGCAG
TCCGCTGGAGGACCTGGCCCTCCTGGAGGCACTGAGTGAAGTGGTGCAGAACACTGAAAACCTGAAAGAT
GAAGTATACCATATTTTAAAGGTACTCTTTCTCTTTGAGTTTGATGAACAAGGAAGGGAATTACAGAAGG
CCTTTGAAGATACGCTGCAGTTGATGGAAAGGTCACTTCCAGAAATTTGGACTCTTACTTACCAGCAGAA
TTCAGCTACCCCGGTTCTAGGTCCCAATTCTACTGCAAATAGTATCATGGCATCTTATCAGCAACAGAAG
ACTTCGGTTCCTGTTCTTGATGCTGAGCTTTTTATACCACCAAAGATCAACAGAAGAACCCAGTGGAAGC
TGAGCCTGCTAGACTGA

Translation (1218 aa):
MSWSPDQELVLLATGQQTLIMMTKDFEPILEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAFQMQM
HESALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGLGPALAWKPSGSLIA
STQDKPNQQDIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNADSSVLAVWLEDLQREESSIPKTCVQLWT
VGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTPYRLHVLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVI
DGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSADPTVK
LGAVGGSGFKVCLRTPHLEKRYKIQFENNEDQDVNPLKLGLLTWIEEDVFLAVSHSEFSPRSVIHHLTAA
SSEMDEEHGQLNVSSSAAVDGVIISLCCNSKTKSVVLQLADGQIFKYLWESPSLAIKPWKNSGGFPVRFP
YPCTQTELAMIGEEECVLGLTDRCRFFINDIEVASNITSFAVYDEFLLLTTHSHTCQCFCLRDASFKTLQ
AGLSSNHVSHGEVLRKVERGSRIVTVVPQDTKLVLQMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFEC
MRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHINLFFTELKEEDVTKTMYPAPVTSSVYLSRDPDGN
KIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHL
VDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCG
PEYFPECLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLT
CGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAVLLLLEGAAWEEALR
LVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGLDDEVPHGQESD
LFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLALLEALSEVVQNTENLKD
EVYHILKVLFLFEFDEQGRELQKAFEDTLQLMERSLPEIWTLTYQQNSATPVLGPNSTANSIMASYQQQK
TSVPVLDAELFIPPKINRRTQWKLSLLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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