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Report for CCDS94550.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94550.1 Public Homo sapiens X FRMPD4 24 110 108 CCDS HistoryNCBI Gene:9758Re-query CCDS DB by CCDS ID:94550.1Re-query CCDS DB by GeneID:9758See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94550.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000672010.1 ENSP00000499962.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000672010.1Link to Ensembl Protein Viewer:ENSP00000499962.1Re-query CCDS DB by Nucleotide ID:ENST00000672010Re-query CCDS DB by Protein ID:ENSP00000499962
Original member Current member NCBI NM_001368399.3 NP_001355328.1 Accepted alive Link to Nucleotide Sequence:NM_001368399.3Link to Protein Sequence:NP_001355328.1Re-query CCDS DB by Nucleotide ID:NM_001368399Re-query CCDS DB by Protein ID:NP_001355328Link to BLAST:NP_001355328.1

Chromosomal Locations for CCDS 94550.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 12137734 12137765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12498680 12498796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12609721 12609881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12614779 12614881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12674863 12674908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12683483 12683587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12686097 12686204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12690195 12690326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12694335 12694454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12701874 12702010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12704359 12704485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12706826 12706915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12707469 12707651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12710399 12710537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12716069 12717133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12717501 12718790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 12720529 12720533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3960 nt):
ATGGCTGCAACTTGGAGTTTACTCTGCCTAAGCCACAGGACGAAGTCTTCAGGCTGGCCGCCTCCCTCGG
GAACCTGGGGCTTGAGCCAGGTGCCGCCCTATGGATGGGAGATGACGGCAAACCGAGATGGGCGAGACTA
CTTCATCAATCACATGACACAGGCAATCCCTTTTGACGACCCTCGGTTAGAGAGCTGCCAAATCATCCCT
CCGGCTCCTCGGAAGGTGGAGATGAGAAGGGACCCCGTGCTGGGATTTGGTTTTGTGGCAGGCAGTGAAA
AGCCAGTGGTCGTTCGCTCAGTAACACCAGGTGGCCCCTCTGAAGGCAAGCTGATCCCGGGAGATCAGAT
TGTAATGATTAATGATGAACCGGTCAGCGCTGCACCCAGAGAGCGGGTCATCGATCTGGTCAGAAGCTGC
AAAGAATCGATACTCCTCACTGTCATTCAGCCTTACCCTTCTCCCAAATCAGCATTTATTAGTGCTGCAA
AAAAGGCAAGATTAAAGTCCAATCCTGTCAAAGTACGCTTCTCTGAGGAGGTCATCATCAACGGCCAAGT
GTCGGAAACTGTTAAGGACAACTCACTTCTTTTTATGCCAAATGTTTTGAAAGTCTATCTGGAAAATGGG
CAGACCAAATCATTTCGTTTTGACTGCAGCACTTCCATTAAGGATGTCATCTTAACCCTTCAAGAGAAGC
TCTCCATCAAAGGCATTGAACACTTCTCTCTCATGCTGGAGCAGAGGACAGAAGGGGCTGGAACGAAGCT
GCTCTTGCTTCATGAACAGGAGACTCTAACTCAGGTGACACAGAGGCCCAGCTCCCATAAGATGAGATGT
CTTTTCCGAATTAGCTTCGTCCCAAAAGATCCAATTGACCTTTTAAGGAGAGATCCAGTTGCTTTCGAGT
ATCTCTATGTTCAGAGTTGTAACGATGTGGTTCAGGAGCGATTTGGGCCGGAGCTGAAATATGACATAGC
CCTGCGGCTGGCCGCATTACAAATGTACATTGCAACCGTTACCACCAAGCAAACGCAGAAAATCTCCCTC
AAATACATCGAAAAAGAATGGGGATTAGAGACTTTTCTTCCCTCTGCTGTGCTGCAAAGCATGAAAGAGA
AGAACATAAAGAAAGCACTTTCACACCTTGTCAAAGCAAATCAAAACTTGGTACCACCGGGTAAAAAGCT
CTCTGCACTACAAGCCAAGGTCCATTATCTCAAGTTCCTCAGTGACCTACGATTGTATGGGGGCCGTGTG
TTCAAGGCAACATTAGTGCAGGCAGAAAAGCGCTCGGAAGTGACTCTCCTGGTTGGGCCCCGGTATGGCA
TAAGCCATGTCATCAACACCAAAACCAATCTGGTGGCTCTTTTAGCCGACTTTAGCCACGTCAACAGGAT
CGAAATGTTTTCCGAGGAGGAGAGCTTGGTGCGGGTAGAACTCCACGTGCTAGATGTGAAGCCTATCACG
CTTCTGATGGAATCCTCAGATGCCATGAACCTGGCCTGCTTGACGGCTGGATACTACCGGCTGCTTGTTG
ATTCCAGGAGGTCGATATTTAACATGGCCAACAAGAAAAACACAGCGACCCAGGAAACAGGACCTGAAAA
CAAGGGGAAGCATAACCTCCTTGGCCCAGATTGGAACTGTATACCCCAAATGACCACCTTTATTGGCGAA
GGGGAACAAGAAGCCCAGATAACATACATAGATTCAAAGCAGAAGACGGTGGAGATCACAGACAGCACCA
TGTGTCCAAAAGAGCACCGGCACTTGTACATAGACAATGCCTATAGTTCAGATGGACTTAACCAGCAGCT
GAGCCAGCCCGGGGAGGCCCCCTGTGAGGCAGACTACAGAAGTCTAGCTCAGCGGTCCCTATTGACCCTC
TCAGGACCAGAAACTCTGAAGAAAGCACAGGAATCTCCGAGAGGAGCTAAAGTGTCCTTTATTTTTGGAG
ACTTCGCCTTGGATGATGGTATTAGTCCCCCAACCCTTGGCTATGAAACGCTACTAGATGAGGGTCCTGA
AATGCTGGAGAAGCAGAGAAATCTCTACATTGGCAGTGCCAATGACATGAAGGGCCTGGATCTCACTCCA
GAGGCAGAGGGCATCCAGTTTGTGGAAAATTCTGTTTATGCAAACATAGGCGATGTGAAGAGCTTCCAGG
CCGCGGAGGGGATCGAGGAACCCCTCTTGCATGACATCTGTTATGCAGAAAACACTGATGACGCGGAGGA
CGAGGACGAGGTGAGCTGCGAGGAGGACCTCGTGGTGGGGGAGATGAACCAGCCGGCCATCCTCAACCTG
TCTGGGTCAAGCGATGACATCATTGACCTCACATCCCTGCCCCCTCCAGAAGGTGATGACAATGAGGATG
ACTTCCTGTTGCGTTCCTTGAACATGGCCATTGCCGCACCCCCACCTGGCTTTAGAGACAGTTCAGATGA
AGAGGACTCTCAGAGCCAGGCAGCTTCCTTCCCCGAGGACAAGGAGAAAGGCAGCAGCCTGCAAAATGAT
GAGATCCCCGTGTCCCTCATTGACGCTGTGCCCACCAGCGCCGAAGGCAAGTGTGAGAAGGGACTGGATA
ATGCCGTCGTCTCCACGCTGGGAGCTCTAGAGGCTCTATCCGTGTCAGAAGAACAGCAGACCAGTGACAA
TTCAGGTGTAGCCATCTTGCGGGCTTATAGTCCTGAGTCTTCGTCAGACTCGGGCAATGAAACTAACTCT
TCTGAAATGACTGAGAGTTCTGAACTGGCCACAGCACAAAAACAGTCAGAAAACCTCTCCCGCATGTTCT
TGGCCACTCACGAAGGCTACCACCCCCTTGCAGAAGAGCAGACCGAGTTCCCGGCCTCCAAGACCCCCGC
TGGGGGCTTGCCTCCAAAGTCCTCGCACGCCCTGGCTGCTAGGCCAGCAACCGACCTCCCGCCCAAAGTT
GTGCCTTCCAAGCAGTTACTTCACTCAGACCACATGGAGATGGAGCCTGAAACTATGGAGACTAAGTCGG
TCACTGACTATTTTAGCAAACTGCACATGGGGTCGGTGGCATACTCCTGCACTAGCAAAAGGAAAAGCAA
GCTGGCCGATGGTGAGGGGAAGGCACCCCCTAATGGGAACACAACAGGAAAAAAACAGCAGGGGACCAAA
ACGGCAGAGATGGAGGAGGAGGCCAGTGGTAAATTTGGTACTGTGTCTTCACGAGACAGTCAACACCTGA
GCACTTTTAATCTGGAGAGAACTGCCTTTCGCAAGGACAGTCAAAGATGGTATGTGGCCACTGAAGGTGG
GATGGCTGAAAAAAGTGGATTAGAAGCAGCAACAGGGAAAACCTTTCCAAGAGCTTCTGGTCTTGGGGCA
AGGGAGGCCGAAGGGAAGGAAGAAGGAGCTCCTGATGGAGAAACCAGTGATGGCTCAGGACTTGGTCAAG
GGGACCGCTTCTTAACTGACGTGACCTGTGCATCTTCAGCCAAAGACTTAGATAACCCAGAGGACGCTGA
CTCGTCCACCTGCGACCATCCTTCCAAGCTTCCTGAGGCTGATGAGAGTGTGGCCCGCCTTTGTGACTAC
CACTTGGCCAAGCGGATGTCATCACTGCAAAGCGAGGGCCATTTTTCTCTGCAGAGCTCCCAAGGCTCTT
CAGTGGATGCAGGCTGTGGCACAGGCAGCAGTGGCAGTGCCTGTGCCACACCCGTGGAGTCGCCGCTCTG
CCCCTCCCTGGGGAAGCACTTGATTCCTGACGCTTCTGGGAAAGGCGTGAATTACATTCCTTCAGAGGAG
AGAGCCCCTGGGCTTCCCAACCACGGAGCCACCTTTAAGGAACTGCACCCACAGACAGAAGGGATGTGTC
CACGGATGACAGTGCCTGCTCTGCACACAGCCATTAACACCGAACCCCTGTTTGGCACATTGAGAGATGG
ATGCCATCGGCTCCCCAAGATTAAGGAAACCACAGTGTAG

Translation (1319 aa):
MAATWSLLCLSHRTKSSGWPPPSGTWGLSQVPPYGWEMTANRDGRDYFINHMTQAIPFDDPRLESCQIIP
PAPRKVEMRRDPVLGFGFVAGSEKPVVVRSVTPGGPSEGKLIPGDQIVMINDEPVSAAPRERVIDLVRSC
KESILLTVIQPYPSPKSAFISAAKKARLKSNPVKVRFSEEVIINGQVSETVKDNSLLFMPNVLKVYLENG
QTKSFRFDCSTSIKDVILTLQEKLSIKGIEHFSLMLEQRTEGAGTKLLLLHEQETLTQVTQRPSSHKMRC
LFRISFVPKDPIDLLRRDPVAFEYLYVQSCNDVVQERFGPELKYDIALRLAALQMYIATVTTKQTQKISL
KYIEKEWGLETFLPSAVLQSMKEKNIKKALSHLVKANQNLVPPGKKLSALQAKVHYLKFLSDLRLYGGRV
FKATLVQAEKRSEVTLLVGPRYGISHVINTKTNLVALLADFSHVNRIEMFSEEESLVRVELHVLDVKPIT
LLMESSDAMNLACLTAGYYRLLVDSRRSIFNMANKKNTATQETGPENKGKHNLLGPDWNCIPQMTTFIGE
GEQEAQITYIDSKQKTVEITDSTMCPKEHRHLYIDNAYSSDGLNQQLSQPGEAPCEADYRSLAQRSLLTL
SGPETLKKAQESPRGAKVSFIFGDFALDDGISPPTLGYETLLDEGPEMLEKQRNLYIGSANDMKGLDLTP
EAEGIQFVENSVYANIGDVKSFQAAEGIEEPLLHDICYAENTDDAEDEDEVSCEEDLVVGEMNQPAILNL
SGSSDDIIDLTSLPPPEGDDNEDDFLLRSLNMAIAAPPPGFRDSSDEEDSQSQAASFPEDKEKGSSLQND
EIPVSLIDAVPTSAEGKCEKGLDNAVVSTLGALEALSVSEEQQTSDNSGVAILRAYSPESSSDSGNETNS
SEMTESSELATAQKQSENLSRMFLATHEGYHPLAEEQTEFPASKTPAGGLPPKSSHALAARPATDLPPKV
VPSKQLLHSDHMEMEPETMETKSVTDYFSKLHMGSVAYSCTSKRKSKLADGEGKAPPNGNTTGKKQQGTK
TAEMEEEASGKFGTVSSRDSQHLSTFNLERTAFRKDSQRWYVATEGGMAEKSGLEAATGKTFPRASGLGA
REAEGKEEGAPDGETSDGSGLGQGDRFLTDVTCASSAKDLDNPEDADSSTCDHPSKLPEADESVARLCDY
HLAKRMSSLQSEGHFSLQSSQGSSVDAGCGTGSSGSACATPVESPLCPSLGKHLIPDASGKGVNYIPSEE
RAPGLPNHGATFKELHPQTEGMCPRMTVPALHTAINTEPLFGTLRDGCHRLPKIKETTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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