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Report for CCDS94554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94554.1 Public Homo sapiens X FANCB 24 110 108 CCDS HistoryNCBI Gene:2187Re-query CCDS DB by CCDS ID:94554.1Re-query CCDS DB by GeneID:2187See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94554.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000696352.1 ENSP00000512573.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696352.1Link to Ensembl Protein Viewer:ENSP00000512573.1Re-query CCDS DB by Nucleotide ID:ENST00000696352Re-query CCDS DB by Protein ID:ENSP00000512573
Original member Current member EBI ENST00000696353.1 ENSP00000512574.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696353.1Link to Ensembl Protein Viewer:ENSP00000512574.1Re-query CCDS DB by Nucleotide ID:ENST00000696353Re-query CCDS DB by Protein ID:ENSP00000512574
Current member NCBI NM_001410764.1 NP_001397693.1 Accepted alive Link to Nucleotide Sequence:NM_001410764.1Link to Protein Sequence:NP_001397693.1Re-query CCDS DB by Nucleotide ID:NM_001410764Re-query CCDS DB by Protein ID:NP_001397693Link to BLAST:NP_001397693.1

Chromosomal Locations for CCDS 94554.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 14796267 14796300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14796770 14796921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14797182 14797298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14843660 14843981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14844503 14844740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14844856 14845286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14850505 14850674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14853039 14853167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14857862 14857954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14859182 14859334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14864560 14865510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2790 nt):
ATGACTAGCAAACAAGCAATGTCATCTAACGAACAAGAAAGGCTCTTGTGTTATAATGGGGAAGTCCTTG
TTTTCCAGTTGTCTAAAGGAAATTTTGCAGATAAAGAGCCTACAAAAACACCCATATTACATGTCAGAAG
AATGGTATTTGACAGAGGAACAAAAGTATTTGTTCAGAAGTCCACTGGATTTTTTACCATAAAGGAAGAA
AACTCTCATTTAAAAATCATGTGTTGCAACTGTGTGTCAGATTTCAGAACTGGAATTAACCTCCCTTACA
TTGTGATAGAAAAAAATAAAAAGAATAATGTTTTTGAATATTTTTTACTAATCCTTCACAGTACTAATAA
ATTTGAAATGCGTTTGAGTTTTAAACTAGGCTATGAGATGAAGGATGGCCTAAGGGTCCTTAATGGCCCT
TTAATTTTATGGAGGCATGTCAAAGCATTCTTCTTTATCTCTTCTCAAACTGGCAAAGTTGTTAGTGTGT
CAGGTAACTTTTCCTCTATTCAGTGGGCAGGGGAGATTGAAAATTTAGGTATGGTTTTATTGGGACTAAA
GGAATGTTGTTTATCTGAGGAAGAATGTACTCAAGAGCCTTCAAAATCAGATTATGCAATTTGGAATACC
AAATTTTGTGTATATTCTCTTGAAAGTCAAGAAGTATTAAGTGATATATACATTATTCCTCCTGCTTACA
GCAGTGTGGTGACTTATGTACATATTTGTGCAACTGAGATCATCAAAAACCAGTTAAGAATATCTCTCAT
TGCCCTTACTCGAAAGAATCAGCTGATTTCATTTCAGAATGGAACTCCTAAAAATGTGTGCCAGCTTCCA
TTTGGAGATCCTTGTGCAGTTCAACTTATGGATTCAGGTGGAGGAAACCTCTTTTTCGTTGTATCCTTTA
TATCCAATAATGCTTGTGCTGTATGGAAAGAGAGCTTTCAGGTTGCTGCTAAATGGGAAAAACTTAGCTT
AGTACTGATAGATGACTTTATTGGAAGTGGAACTGAACAAGTACTCCTACTTTTTAAGGACTCCTTGAAC
TCAGACTGCCTGACTTCATTTAAAATAACGGATCTTGGAAAAATAAACTATTCGAGTGAACCATCAGATT
GCAATGAAGATGACTTATTTGAAGACAAACAAGAGAATCGTTACCTGGTGGTTCCACCTCTAGAAACAGG
ACTGAAAGTTTGTTTTTCTTCTTTTCGGGAATTACGGCAGCATCTGTTGCTTAAGGAAAAAATTATTTCA
AAATCTTACAAAGCTTTAATAAACCTAGTTCAAGGAAAAGATGATAATACGTCAAGTGCAGAGGAGAAGG
AATGTCTTGTTCCTCTTTGTGGTGAAGAAGAAAATTCTGTCCATATCTTAGATGAAAAGTTATCAGACAA
TTTTCAAGATTCAGAACAGCTAGTAGAGAAGATATGGTATCGTGTAATAGATGATAGCTTGGTTGTTGGA
GTGAAAACTACATCTTCTTTGAAGCTGTCCCTGAATGATGTGACTTTATCATTGTTAATGGATCAAGCCC
ATGACTCCAGATTTCGGCTTCTAAAGTGTCAAAATAGGGTGATTAAGTTGAGTACAAATCCTTTCCCAGC
ACCATACTTGATGCCATGTGAAATAGGATTGGAAGCAAAAAGGGTCACGTTGACCCCTGATAGCAAGAAA
GAGGAAAGCTTTGTTTGTGAACACCCATCTAAGAAAGAGTGTGTACAGATAATTACTGCTGTAACATCTC
TTTCACCACTTTTAACATTCAGTAAATTTTGTTGCACTGTACTGCTACAAATTATGGAGAGAGAAAGTGG
TAACTGTCCTAAAGATCGTTATGTTGTGTGTGGCAGAGTTTTTTTAAGTCTAGAAGATCTTTCAACTGGG
AAGTACCTACTGACATTTCCAAAGAAGAAACCTATAGAGCACATGGAAGATCTTTTTGCACTTCTTGCAG
CATTCCATAAATCTTGTTTTCAAATCACATCACCCGGCTATGCCCTGAATTCAATGAAGGTGTGGCTCTT
AGAACATATGAAATGTGAAATAATCAAAGAATTTCCAGAAGTGTACTTTTGTGAAAGACCGGGAAGTTTC
TATGGGACACTCTTCACTTGGAAACAGAGAACACCATTCGAAGGGATTTTAATAATCTATTCCAGGAATC
AAACAGTTATGTTCCAGTGCCTTCATAATCTCATCAGAATTCTCCCTATAAACTGTTTCCTCAAAAATCT
AAAATCAGGAAGTGAGAATTTCCTAATTGATAATATGGCATTTACTTTGGAGAAGGAACTAGTCACCCTT
AGTTCTCTTTCTTCTGCCATAGCTAAACATGAAAGCAATTTTATGCAGAGGTGTGAAGTGAGCAAAGGAA
AGAGTAGTGTCGTCGCGGCTGCTTTATCAGACAGAAGGGAAAATATCCATCCCTACAGAAAAGAACTTCA
GAGAGAAAAGAAGAAAATGTTGCAAACGAACCTAAAAATCACATGTTTTGGGGAAAGCCAGCCAACCTGC
CATGAGGACACTCAAGCAGCCCTAGGAAGAGTCCTACCTTGCAAAGATCTGAGGCCTCCTGCTAACAGCC
AGCAAGGAATTGAGAACTCCAACTGCCAGCTTTTGGGCTGGAATCAACACCACCAGCTCTCCTGGTTCTC
AGGTCTTCAGACTTGGACTGGAACTATATCATTGGCTCTCCTGGATCTCCAGCTTGCTGACTGCAGATCT
TGGGACTACTCAGCTTCGATAATCATCCACGTTGGAAACCCCAGTCAAGCCTTCAGATGA

Translation (929 aa):
MTSKQAMSSNEQERLLCYNGEVLVFQLSKGNFADKEPTKTPILHVRRMVFDRGTKVFVQKSTGFFTIKEE
NSHLKIMCCNCVSDFRTGINLPYIVIEKNKKNNVFEYFLLILHSTNKFEMRLSFKLGYEMKDGLRVLNGP
LILWRHVKAFFFISSQTGKVVSVSGNFSSIQWAGEIENLGMVLLGLKECCLSEEECTQEPSKSDYAIWNT
KFCVYSLESQEVLSDIYIIPPAYSSVVTYVHICATEIIKNQLRISLIALTRKNQLISFQNGTPKNVCQLP
FGDPCAVQLMDSGGGNLFFVVSFISNNACAVWKESFQVAAKWEKLSLVLIDDFIGSGTEQVLLLFKDSLN
SDCLTSFKITDLGKINYSSEPSDCNEDDLFEDKQENRYLVVPPLETGLKVCFSSFRELRQHLLLKEKIIS
KSYKALINLVQGKDDNTSSAEEKECLVPLCGEEENSVHILDEKLSDNFQDSEQLVEKIWYRVIDDSLVVG
VKTTSSLKLSLNDVTLSLLMDQAHDSRFRLLKCQNRVIKLSTNPFPAPYLMPCEIGLEAKRVTLTPDSKK
EESFVCEHPSKKECVQIITAVTSLSPLLTFSKFCCTVLLQIMERESGNCPKDRYVVCGRVFLSLEDLSTG
KYLLTFPKKKPIEHMEDLFALLAAFHKSCFQITSPGYALNSMKVWLLEHMKCEIIKEFPEVYFCERPGSF
YGTLFTWKQRTPFEGILIIYSRNQTVMFQCLHNLIRILPINCFLKNLKSGSENFLIDNMAFTLEKELVTL
SSLSSAIAKHESNFMQRCEVSKGKSSVVAAALSDRRENIHPYRKELQREKKKMLQTNLKITCFGESQPTC
HEDTQAALGRVLPCKDLRPPANSQQGIENSNCQLLGWNQHHQLSWFSGLQTWTGTISLALLDLQLADCRS
WDYSASIIIHVGNPSQAFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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