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Report for CCDS94643.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94643.1 Public Homo sapiens X ZMAT1 24 110 108 CCDS HistoryNCBI Gene:84460Re-query CCDS DB by CCDS ID:94643.1Re-query CCDS DB by GeneID:84460See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94643.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000651725.2 ENSP00000498446.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651725.2Link to Ensembl Protein Viewer:ENSP00000498446.1Re-query CCDS DB by Nucleotide ID:ENST00000651725Re-query CCDS DB by Protein ID:ENSP00000498446
Original member Current member NCBI NM_001394560.1 NP_001381489.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394560.1Link to Protein Sequence:NP_001381489.1Re-query CCDS DB by Nucleotide ID:NM_001394560Re-query CCDS DB by Protein ID:NP_001381489Link to BLAST:NP_001381489.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381489.1 695 Q5H9K5-3 695 100% 0 0

Chromosomal Locations for CCDS 94643.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101883510 101884821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101886632 101886731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101897868 101898042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101898119 101898220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101904224 101904330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 101931717 101932008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGGCGGCGGCGCCGAGCACAGTCACCCCGCTGGCGGCGGAGTCTTCCCCTCAGGAAGCTACCGTCTCTG
CCGCCTCCTCCTCCTCCTACACCGCCTGCGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAGTAATTGT
TCCTGCCTCCTCCGCCACCTCCGCCCCTGCCTGCCCGCCTGCCGGTGGCTGTGGCGACGGCGGCGGCGGC
GGCTTTGGCGGCTCCACTATGGCGGCGGCGGGGAGGGGGGGCAGTAGTTTTAAAGTAGACACCCGCCCTT
GCCTCAGAGAAGACGCCATTTGGAATGAACAGGAAAAGGCTGAACTTTTTACAGATAAGTTTTGTCAAGT
ATGTGGAGTGATGCTACAGTTTGAATCACAAAGAATTTCACATTATGAGGGTGAAAAACATGCTCAAAAT
GTTAGTTTTTATTTTCAAATGCATGGGGAACAAAATGAAGTGCCTGGTAAGAAAATGAAGATGCATGTTG
AGAATTTTCAGGTGCATAGGTATGAAGGAGTGGACAAAAACAAATTTTGTGATCTCTGCAACATGATGTT
TAGCTCTCCACTTATTGCTCAGTCTCACTATGTGGGAAAGGTCCATGCTAAAAAACTGAAGCAATTAATG
GAGGAACATGATCAGGCATCTCCATCAGGATTTCAACCAGAGATGGCATTTAGTATGAGAACCTATGTTT
GCCATATTTGTAGTATTGCTTTTACATCTTTAGATATGTTCCGGTCCCACATGCAAGGAAGTGAACATCA
AATTAAAGAATCCATTGTTATCAATCTAGTGAAGAATTCAAGGAAGACACAAGACTCTTACCAAAATGAG
TGTGCAGATTACATCAATGTGCAGAAAGCCAGAGGACTAGAGGCCAAGACTTGTTTCAGAAAGATGGAAG
AGAGTTCTTTGGAAACCCGTAGATACAGAGAAGTGGTCGATTCCAGACCCAGACATAGAATGTTTGAACA
AAGACTCCCATTTGAGACTTTCCGGACATACGCAGCACCATACAATATTTCACAAGCAATGGAAAAGCAG
TTACCTCATTCAAAGAAGACATATGACTCTTTCCAAGATGAACTTGAAGATTACATCAAAGTACAGAAAG
CCAGAGGACTAGATCCAAAGACTTGTTTCAGAAAGATGAGAGAGAACTCTGTGGATACTCATGGGTACAG
AGAAATGGTTGATTCTGGACCCAGATCAAGAATGTGTGAGCAAAGATTTTCACATGAGGCTTCCCAGACC
TACCAACGACCATACCATATTTCACCAGTGGAAAGCCAGTTACCTCAGTGGCTACCAACCCATTCAAAGA
GGACATATGATTCTTTCCAAGATGAACTTGAAGATTACATAAAAGTGCAGAAAGCCAGAGGACTAGAGCC
AAAAACTTGTTTCAGAAAGATAGGAGATAGCTCTGTAGAAACACACAGGAACAGAGAAATGGTTGATGTC
AGACCCAGACATAGAATGTTGGAGCAAAAGCTCCCATGTGAGACTTTCCAGACCTATTCAGGACCATATA
GTATTTCACAAGTAGTGGAAAACCAGTTACCTCATTGCTTACCAGCTCATGATAGCAAACAGAGACTAGA
TTCTATTAGCTACTGTCAACTCACCAGAGACTGTTTCCCAGAAAAACCAGTACCCTTGAGCCTTAATCAG
CAAGAAAATAACTCTGGCTCATACAGTGTAGAATCTGAAGTTTACAAGCACCTCTCTTCAGAAAACAATA
CTGCTGACCATCAAGCAGGTCATAAACGGAAACATCAGAAGAGAAAACGACACCTAGAAGAAGGCAAAGA
AAGGCCAGAGAAAGAGCAGTCCAAGCATAAAAGGAAAAAGAGTTATGAAGATACAGATTTAGACAAAGAC
AAGAGCATCAGACAAAGGAAAAGAGAGGAGGATAGAGTCAAGGTCAGTTCAGGAAAGCTTAAGCATCGAA
AAAAGAAAAAAAGCCATGATGTACCCTCCGAGAAAGAAGAACGTAAGCACAGGAAAGAGAAAAAGAAATC
TGTTGAAGAAAGGACAGAAGAGGAAATGCTTTGGGATGAGTCTATTCTTGGATTTTGA

Translation (695 aa):
MAAAPSTVTPLAAESSPQEATVSAASSSSYTACAAAAAAAAAAAVIVPASSATSAPACPPAGGCGDGGGG
GFGGSTMAAAGRGGSSFKVDTRPCLREDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKHAQN
VSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQLM
EEHDQASPSGFQPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVKNSRKTQDSYQNE
CADYINVQKARGLEAKTCFRKMEESSLETRRYREVVDSRPRHRMFEQRLPFETFRTYAAPYNISQAMEKQ
LPHSKKTYDSFQDELEDYIKVQKARGLDPKTCFRKMRENSVDTHGYREMVDSGPRSRMCEQRFSHEASQT
YQRPYHISPVESQLPQWLPTHSKRTYDSFQDELEDYIKVQKARGLEPKTCFRKIGDSSVETHRNREMVDV
RPRHRMLEQKLPCETFQTYSGPYSISQVVENQLPHCLPAHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQ
QENNSGSYSVESEVYKHLSSENNTADHQAGHKRKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKD
KSIRQRKREEDRVKVSSGKLKHRKKKKSHDVPSEKEERKHRKEKKKSVEERTEEEMLWDESILGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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