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Report for CCDS94669.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94669.1 Public Homo sapiens X PABIR3 24 110 108 CCDS HistoryNCBI Gene:159091Re-query CCDS DB by CCDS ID:94669.1Re-query CCDS DB by GeneID:159091See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94669.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000645288.1 ENSP00000493993.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645288.1Link to Ensembl Protein Viewer:ENSP00000493993.1Re-query CCDS DB by Nucleotide ID:ENST00000645288Re-query CCDS DB by Protein ID:ENSP00000493993
Original member Current member EBI ENST00000647516.1 ENSP00000494367.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647516.1Link to Ensembl Protein Viewer:ENSP00000494367.1Re-query CCDS DB by Nucleotide ID:ENST00000647516Re-query CCDS DB by Protein ID:ENSP00000494367
Original member Current member NCBI NM_001365743.2 NP_001352672.1 Accepted alive Link to Nucleotide Sequence:NM_001365743.2Link to Protein Sequence:NP_001352672.1Re-query CCDS DB by Nucleotide ID:NM_001365743Re-query CCDS DB by Protein ID:NP_001352672Link to BLAST:NP_001352672.1
Original member Current member NCBI NM_001388444.1 NP_001375373.1 Accepted alive Link to Nucleotide Sequence:NM_001388444.1Link to Protein Sequence:NP_001375373.1Re-query CCDS DB by Nucleotide ID:NM_001388444Re-query CCDS DB by Protein ID:NP_001375373Link to BLAST:NP_001375373.1
Original member Current member NCBI NM_001388445.1 NP_001375374.1 Accepted alive Link to Nucleotide Sequence:NM_001388445.1Link to Protein Sequence:NP_001375374.1Re-query CCDS DB by Nucleotide ID:NM_001388445Re-query CCDS DB by Protein ID:NP_001375374Link to BLAST:NP_001375374.1

Chromosomal Locations for CCDS 94669.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 134804198 134804246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134807540 134807708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 134809187 134809373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGCATATTTCCCTGGAACTGGAAGGACTGATCAAGAAACACAGCTAGACTTGTCCTTGTGTGGACGGG
AGCCGGAAAGCCTTGAGAACTTATTCCTCGACCCGGACATGGCACAGGAGAAAATGAAACTAGGTTTCAA
GTCGCTGCCGAGTTCCACTACCGCAGACGGCAACATTCTGAGAAGAGTCAACAGTGCCCCTTTGATCAAT
GGACTTGGACGGAGTCTCACTGTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACC
TCTGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGACTCCCGAGTAGCTGGGACTTCAGGCACCCGCCA
CCACGCCCACCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAG

Translation (134 aa):
MAYFPGTGRTDQETQLDLSLCGREPESLENLFLDPDMAQEKMKLGFKSLPSSTTADGNILRRVNSAPLIN
GLGRSLTVSPRLECSGMISAHCNLCLPGSSDSPASDSRVAGTSGTRHHAHLIFCIFSRDGVSPC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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