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Report for CCDS94694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94694.1 Public Homo sapiens X PNMA6E 24 110 108 CCDS HistoryNCBI Gene:649238Re-query CCDS DB by CCDS ID:94694.1Re-query CCDS DB by GeneID:649238See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000445091.3 ENSP00000488500.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000445091.3Link to Ensembl Protein Viewer:ENSP00000488500.1Re-query CCDS DB by Nucleotide ID:ENST00000445091Re-query CCDS DB by Protein ID:ENSP00000488500
Original member Current member NCBI NM_001367770.1 NP_001354699.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001367770.1Link to Protein Sequence:NP_001354699.1Re-query CCDS DB by Nucleotide ID:NM_001367770Re-query CCDS DB by Protein ID:NP_001354699Link to BLAST:NP_001354699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001354699.1 647 A0A0J9YXQ4 647 100% 0 0

Chromosomal Locations for CCDS 94694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153396906 153398849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1944 nt):
ATGGCTCTGGCGATGCTTCGGGACTGGTGCAGGTGGATGGGTGCGAACGCAGAGCGCTCCCTGCTCATCC
TGGGTATCCCTGATGACTGCAAGGAACATGAGTTCCAGGAGGCCGTGCGGGCTGCCCTGTCGCCCCTGGG
CAGGTACCGAGTACTCACCAAGCACTTCAGAAAGGAGCTCGGGGCCAAGGCAGCCTTGGTGGAGTTCGCT
GAGTATTTAAACCGAAGCTTGATTCCCCATCAAATACCAGGCAATGGGGGGCCCTGGAAAGTGATCTTCC
TGCCCCAAGTACCTGTTATTGAGTTTCAGGATATGCCCAGTTTTCCTGCACAGCCCCAGGGTCAAGCAGT
AGCAAAAGCTGCAGGTGAGGGAGGAGGCGCAGGTGAGGCAGGAGGTGTAGGTGAGGTAGGAGCAGCAGGT
GAGGCAGGAGGCACAGGTGAGGCAGGAGCAACAGGTGAGGCAGGAGCAGCAGGTGAGGCAGGAGGCGCAG
GTGAGGCAGGAGGTGTAGGTGAGGCAGGAGCAGCAGGTGAGGCAGGAGGCGCAGGTGAGGCAGGAGCAGC
AGGTGAGGGAGGAGCAGCAGGTGAGGCAGGAGGCGCAGGTGAGGCAGGAGGTGTAGGTGAGGCAGGAGCA
GCAGGTGAGGCAGGAGGCGCAGGTGAGGCAGGAGGTGTAGGTGAGGCAGGAGCAGCAGGTGAGGCAGGAG
GCGCAGGTGAGGCAGGAGCAGCAGGTGAGGCAGGAGGCGCAGGTGAGGGAAGAGCAGCAGGTGAGGCAGG
AGCAGCAGGTGAGGCAGGAGCTGTGGGTGAGGCAGGAGCAGCAGGTGAGGCAGGAGCTGTGGGTGAGGCA
GGAGCTGCAGGTGAGGCAGGAGCTGTGGGTGAAGCAGGAGGGACAAATGTAACAAAAGCCTGGGTCCAGC
CTTGGCGCTGCACCCTACAGCCTGTGCTGGAAAACAGGGCCTACCGGGAATTGAGACCCTTTTCCAGGAG
GGAGCAGCCAGGCTGCGAGGAAGAGTCCTTTGAGAGCTGGGTGGAGCATGCCAAGGATATGCTGCAGCTG
TGGTGCCATGCGTCGGAAAGGGAGAAGAAGAGGTGGCTGCTGGAGAGCTTGGGCGGCCCGGCCCTGGAAG
TCGTGAGCGGCCTCCTGGAGGAAGATACCAACTTGTCCGCGCTGGACTGCCTGGCGGCGCTGGGGCAGGT
ATTTAGGAACCAGGACACTCGAATGACTTCGAGGCTGAAGTTCCTGACCTGCACGCAGGGGCCCCAGGAG
GGGCTGTTTGCCTTCGTGGTGCGCCTGGAAGGCCTGCTGCAGAGGGCTGTGGAGAAGGGGGCCGTCTGCC
CAGCCTTGGCCAATTACCTGCGACTACAGCAGGTGCTGTCTTGGGCCCGCCCCAGCGAGGCACTCCAGGA
TACCCTGAGAGGGATGCAGCTGGAGAAGAGGCCACCTGGCTTCCTGGGGCTGCTCCGGCTCATCCGGGAG
ATGGAGGCATGGGCAGCCTTCCCAGCGAGGAGCCAGCAGGGTGTGGCCTGGGCAGCGGCCCCAGTGGAGA
GTGAAGACCCAGCTGCTGCCCAGGCCTCCCCAGCCCAGGGGAATGCCAGCGAGGCTGGTCCCGGAGCAGA
AGATGCTGCCGAGGCCGCTTCTGCCACCAAAGAGGCTGCAAGGGGAGCCCCTGCCGCTGGGGAAGGTGAA
AGTGCCCCTGCAGGCCCCGAAGGCCTAGGTCAGGCAAGGCCCATAGAGGTCCCCTGGGGCTCCTCCCCAG
CCCGGATGAGCAGTGCTGTCTGGGTGTTCCCAAGAGGTCTTAGCTGGGGTCCAGAGGGCCTCATCCAGGT
GAGAGGCCAGGAAGCCAGGAAACCCCCACTGGAGGGGCTCCAGACCATCTTGGAGGAGCCGGAAAACGAG
GATGAGGATGGGGCCGGGGACGAGGGCCAGCCCAAGTCCTCCCAGGGCAAATAG

Translation (647 aa):
MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKELGAKAALVEFA
EYLNRSLIPHQIPGNGGPWKVIFLPQVPVIEFQDMPSFPAQPQGQAVAKAAGEGGGAGEAGGVGEVGAAG
EAGGTGEAGATGEAGAAGEAGGAGEAGGVGEAGAAGEAGGAGEAGAAGEGGAAGEAGGAGEAGGVGEAGA
AGEAGGAGEAGGVGEAGAAGEAGGAGEAGAAGEAGGAGEGRAAGEAGAAGEAGAVGEAGAAGEAGAVGEA
GAAGEAGAVGEAGGTNVTKAWVQPWRCTLQPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKDMLQL
WCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMTSRLKFLTCTQGPQE
GLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQDTLRGMQLEKRPPGFLGLLRLIRE
MEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDAAEAASATKEAARGAPAAGEGE
SAPAGPEGLGQARPIEVPWGSSPARMSSAVWVFPRGLSWGPEGLIQVRGQEARKPPLEGLQTILEEPENE
DEDGAGDEGQPKSSQGK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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