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Report for CCDS9551.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9551.1 Public Homo sapiens 14 PIP4P1 24 110 108 CCDS HistoryNCBI Gene:90809Re-query CCDS DB by CCDS ID:9551.1Re-query CCDS DB by GeneID:90809See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9551.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250489.9 ENSP00000250489.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250489.9Link to Ensembl Protein Viewer:ENSP00000250489.4Re-query CCDS DB by Nucleotide ID:ENST00000250489Re-query CCDS DB by Protein ID:ENSP00000250489
Original member Current member NCBI NM_144568.4 NP_653169.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144568.4Link to Protein Sequence:NP_653169.2Re-query CCDS DB by Nucleotide ID:NM_144568Re-query CCDS DB by Protein ID:NP_653169Link to BLAST:NP_653169.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653169.2 277 Q86T03-1 277 100% 0 0

Chromosomal Locations for CCDS 9551.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20458559 20458702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20459206 20459296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20459388 20459440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20459628 20459733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20460192 20460298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20460655 20460845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20461184 20461325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGGCGGCAGATGGAGAGCGTTCCCCGCTGCTGTCTGAGCCCATCGACGGTGGCGCGGGCGGCAACGGTT
TAGTGGGGCCCGGCGGGAGTGGGGCTGGGCCCGGGGGAGGCCTGACCCCCTCCGCACCACCGTACGGAGC
CGCATTTCCCCCGTTTCCCGAGGGGCATCCAGCCGTGTTGCCTGGGGAGGACCCACCCCCCTATTCACCC
TTAACTAGCCCGGACAGTGGGAGTGCCCCTATGATCACCTGCCGAGTCTGCCAATCTCTCATCAACGTGG
AAGGCAAGATGCATCAGCATGTAGTCAAATGTGGTGTCTGCAATGAAGCCACCCCAATCAAGAATGCACC
CCCAGGGAAAAAATATGTTCGATGCCCCTGTAACTGTCTCCTTATCTGCAAAGTGACATCCCAACGGATT
GCATGCCCTCGGCCCTACTGCAAAAGAATCATCAACCTGGGGCCTGTGCATCCCGGACCTCTGAGTCCAG
AACCCCAACCCATGGGTGTCAGGGTTATCTGTGGACATTGCAAGAATACTTTTCTGTGGACAGAGTTCAC
AGACCGCACTTTGGCACGTTGTCCTCACTGCAGGAAAGTGTCATCTATTGGGCGCAGATACCCACGTAAG
AGATGTATCTGCTGCTTCTTGCTTGGCTTGCTTTTGGCAGTCACTGCCACTGGCCTTGCCTTTGGCACAT
GGAAGCATGCACGGCGATATGGAGGCATCTATGCAGCCTGGGCATTTGTCATCCTGTTGGCTGTGCTGTG
TTTGGGCCGGGCTCTTTATTGGGCCTGTATGAAGGTCAGCCACCCTGTCCAGAACTTCTCCTGA

Translation (277 aa):
MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAAFPPFPEGHPAVLPGEDPPPYSP
LTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRI
ACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRK
RCICCFLLGLLLAVTATGLAFGTWKHARRYGGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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