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Report for CCDS9565.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9565.1 Public Homo sapiens 14 NDRG2 24 110 108 CCDS HistoryNCBI Gene:57447Re-query CCDS DB by CCDS ID:9565.1Re-query CCDS DB by GeneID:57447See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9565.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298687.9 ENSP00000298687.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000298687.9Link to Ensembl Protein Viewer:ENSP00000298687.5Re-query CCDS DB by Nucleotide ID:ENST00000298687Re-query CCDS DB by Protein ID:ENSP00000298687
Original member Current member EBI ENST00000397851.6 ENSP00000380949.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397851.6Link to Ensembl Protein Viewer:ENSP00000380949.2Re-query CCDS DB by Nucleotide ID:ENST00000397851Re-query CCDS DB by Protein ID:ENSP00000380949
Original member Current member EBI ENST00000397853.7 ENSP00000380951.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397853.7Link to Ensembl Protein Viewer:ENSP00000380951.3Re-query CCDS DB by Nucleotide ID:ENST00000397853Re-query CCDS DB by Protein ID:ENSP00000380951
Original member Current member EBI ENST00000397858.5 ENSP00000380956.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397858.5Link to Ensembl Protein Viewer:ENSP00000380956.1Re-query CCDS DB by Nucleotide ID:ENST00000397858Re-query CCDS DB by Protein ID:ENSP00000380956
Original member Current member EBI ENST00000556147.6 ENSP00000451712.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000556147.6Link to Ensembl Protein Viewer:ENSP00000451712.1Re-query CCDS DB by Nucleotide ID:ENST00000556147Re-query CCDS DB by Protein ID:ENSP00000451712
Original member Current member NCBI NM_001320329.2 NP_001307258.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320329.2Link to Protein Sequence:NP_001307258.1Re-query CCDS DB by Nucleotide ID:NM_001320329Re-query CCDS DB by Protein ID:NP_001307258Link to BLAST:NP_001307258.1
Original member Current member NCBI NM_001354559.2 NP_001341488.1 Accepted alive Link to Nucleotide Sequence:NM_001354559.2Link to Protein Sequence:NP_001341488.1Re-query CCDS DB by Nucleotide ID:NM_001354559Re-query CCDS DB by Protein ID:NP_001341488Link to BLAST:NP_001341488.1
Original member Current member NCBI NM_001354562.2 NP_001341491.1 Accepted alive Link to Nucleotide Sequence:NM_001354562.2Link to Protein Sequence:NP_001341491.1Re-query CCDS DB by Nucleotide ID:NM_001354562Re-query CCDS DB by Protein ID:NP_001341491Link to BLAST:NP_001341491.1
Original member Current member NCBI NM_001354565.2 NP_001341494.1 Accepted alive Link to Nucleotide Sequence:NM_001354565.2Link to Protein Sequence:NP_001341494.1Re-query CCDS DB by Nucleotide ID:NM_001354565Re-query CCDS DB by Protein ID:NP_001341494Link to BLAST:NP_001341494.1
Original member Current member NCBI NM_001354566.1 NP_001341495.1 Accepted alive Link to Nucleotide Sequence:NM_001354566.1Link to Protein Sequence:NP_001341495.1Re-query CCDS DB by Nucleotide ID:NM_001354566Re-query CCDS DB by Protein ID:NP_001341495Link to BLAST:NP_001341495.1
Original member Current member NCBI NM_001354567.2 NP_001341496.1 Accepted alive Link to Nucleotide Sequence:NM_001354567.2Link to Protein Sequence:NP_001341496.1Re-query CCDS DB by Nucleotide ID:NM_001354567Re-query CCDS DB by Protein ID:NP_001341496Link to BLAST:NP_001341496.1
Original member Current member NCBI NM_001354570.2 NP_001341499.1 Accepted alive Link to Nucleotide Sequence:NM_001354570.2Link to Protein Sequence:NP_001341499.1Re-query CCDS DB by Nucleotide ID:NM_001354570Re-query CCDS DB by Protein ID:NP_001341499Link to BLAST:NP_001341499.1
Original member Current member NCBI NM_201535.2 NP_963293.1 Accepted alive Link to Nucleotide Sequence:NM_201535.2Link to Protein Sequence:NP_963293.1Re-query CCDS DB by Nucleotide ID:NM_201535Re-query CCDS DB by Protein ID:NP_963293Link to BLAST:NP_963293.1
Original member Current member NCBI NM_201537.2 NP_963831.1 Accepted alive Link to Nucleotide Sequence:NM_201537.2Link to Protein Sequence:NP_963831.1Re-query CCDS DB by Nucleotide ID:NM_201537Re-query CCDS DB by Protein ID:NP_963831Link to BLAST:NP_963831.1
Original member Current member NCBI NM_201539.2 NP_963833.1 Accepted alive Link to Nucleotide Sequence:NM_201539.2Link to Protein Sequence:NP_963833.1Re-query CCDS DB by Nucleotide ID:NM_201539Re-query CCDS DB by Protein ID:NP_963833Link to BLAST:NP_963833.1
Original member Current member NCBI NM_201540.2 NP_963834.1 Accepted alive Link to Nucleotide Sequence:NM_201540.2Link to Protein Sequence:NP_963834.1Re-query CCDS DB by Nucleotide ID:NM_201540Re-query CCDS DB by Protein ID:NP_963834Link to BLAST:NP_963834.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307258.1 371 Q9UN36-1 371 100% 0 0
NP_001341488.1 371 Q9UN36-1 371 100% 0 0
NP_001341491.1 371 Q9UN36-1 371 100% 0 0
NP_001341494.1 371 Q9UN36-1 371 100% 0 0
NP_001341495.1 371 Q9UN36-1 371 100% 0 0
NP_001341496.1 371 Q9UN36-1 371 100% 0 0
NP_001341499.1 371 Q9UN36-1 371 100% 0 0
NP_963293.1 371 Q9UN36-1 371 100% 0 0
NP_963831.1 371 Q9UN36-1 371 100% 0 0
NP_963833.1 371 Q9UN36-1 371 100% 0 0
NP_963834.1 371 Q9UN36-1 371 100% 0 0

Chromosomal Locations for CCDS 9565.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21017596 21017762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21017987 21018038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018204 21018239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018457 21018504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018763 21018814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019116 21019160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019639 21019742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019920 21019976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21020496 21020582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21020784 21020844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21021817 21021879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21022062 21022182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21022392 21022497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21022864 21022905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21023241 21023315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGG
CCAAGGAGGCTGAGTTAGCTGCCCGAATCCTCCTGGACCAGGGACAGACTCACTCTGTGGAGACACCATA
CGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAAACGCCCAGCGATCCTTACCTACCACGAT
GTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAGTTCGAGGACATGCAGGAAATCATTCAGA
ACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGGGAGCCCCTGTGTTCCCTTTGGGATATCA
GTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGTCCTGCAGTACCTAAATTTCTCTACAATA
ATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGGCGAGATATGCTCTTAACCACCCGGACACTGTTG
AAGGTCTTGTCCTCATCAACATTGATCCCAATGCCAAGGGTTGGATGGATTGGGCAGCCCACAAGCTAAC
AGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCTTTTCAGCCAGGAAGAGCTCTCTGGAAAT
TCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCACCCAACCTGGATAACATTGAATTGTACT
GGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTGGAGGTGATATCACCCTCAGGTGTCCTGT
GATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGTGGTGGAATGTAACTCAAAACTGGACCCC
ACCCAGACCTCGTTCCTCAAGATGGCTGACTCCGGAGGTCAGCCCCAGCTGACTCAGCCAGGCAAGCTGA
CCGAGGCCTTCAAGTACTTCCTGCAAGGCATGGGCTACATGGCCTCATCCTGCATGACTCGCCTGTCCCG
GTCTCGTACAGCCTCTCTGACCAGTGCAGCATCCGTTGATGGCAACCGGTCCCGCTCTCGCACCCTGTCC
CAGAGCAGCGAGTCTGGAACTCTTTCTTCGGGGCCCCCGGGGCACACCATGGAGGTCTCCTGTTGA

Translation (371 aa):
MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHD
VGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTI
IGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGN
SELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDP
TQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLS
QSSESGTLSSGPPGHTMEVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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