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Report for CCDS9566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9566.1 Public Homo sapiens 14 TPPP2 24 110 108 CCDS HistoryNCBI Gene:122664Re-query CCDS DB by CCDS ID:9566.1Re-query CCDS DB by GeneID:122664See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9566.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321760.11 ENSP00000317595.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321760.11Link to Ensembl Protein Viewer:ENSP00000317595.6Re-query CCDS DB by Nucleotide ID:ENST00000321760Re-query CCDS DB by Protein ID:ENSP00000317595
Original member Current member EBI ENST00000530140.6 ENSP00000435356.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530140.6Link to Ensembl Protein Viewer:ENSP00000435356.2Re-query CCDS DB by Nucleotide ID:ENST00000530140Re-query CCDS DB by Protein ID:ENSP00000435356
Original member Current member NCBI NM_173846.5 NP_776245.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173846.5Link to Protein Sequence:NP_776245.2Re-query CCDS DB by Nucleotide ID:NM_173846Re-query CCDS DB by Protein ID:NP_776245Link to BLAST:NP_776245.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776245.2 170 P59282 170 100% 0 0

Chromosomal Locations for CCDS 9566.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21030582 21030754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21031012 21031165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21031892 21032077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGCATCAGAGGCAGAAAAAACATTCCATCGGTTTGCTGCGTTTGGAGAATCATCAAGCAGTGGCACTG
AAATGAACAACAAGAACTTCTCCAAGCTGTGCAAAGACTGTGGCATCATGGATGGCAAGACAGTCACCTC
CACGGACGTGGACATCGTGTTCAGCAAAGTCAAGGCCAAGAACGCCCGAACCATCACGTTTCAACAGTTC
AAAGAGGCAGTGAAGGAACTGGGCCAGAAGCGCTTCAAAGGGAAGAGTCCAGATGAAGTCCTGGAGAACA
TTTATGGACTCATGGAGGGCAAAGACCCAGCCACCACTGGCGCTACTAAAGCAACAACAGTGGGTGCAGT
GGACCGTTTGACAGACACCAGCAAGTACACCGGCACCCACAAGGAGCGCTTTGATGAGAGTGGCAAGGGC
AAGGGCATTGCGGGACGGGAAGAGATGACTGACAACACAGGCTATGTGAGTGGTTACAAGGGTTCTGGCA
CCTACGATAAGAAGACCAAGTAG

Translation (170 aa):
MASEAEKTFHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQF
KEAVKELGQKRFKGKSPDEVLENIYGLMEGKDPATTGATKATTVGAVDRLTDTSKYTGTHKERFDESGKG
KGIAGREEMTDNTGYVSGYKGSGTYDKKTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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