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Report for CCDS9583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9583.1 Public Homo sapiens 14 C14orf93 24 110 108 CCDS HistoryNCBI Gene:60686Re-query CCDS DB by CCDS ID:9583.1Re-query CCDS DB by GeneID:60686See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9583.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299088.11 ENSP00000299088.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299088.11Link to Ensembl Protein Viewer:ENSP00000299088.6Re-query CCDS DB by Nucleotide ID:ENST00000299088Re-query CCDS DB by Protein ID:ENSP00000299088
Original member Current member EBI ENST00000397379.7 ENSP00000380535.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397379.7Link to Ensembl Protein Viewer:ENSP00000380535.3Re-query CCDS DB by Nucleotide ID:ENST00000397379Re-query CCDS DB by Protein ID:ENSP00000380535
Original member Current member EBI ENST00000397382.8 ENSP00000380538.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397382.8Link to Ensembl Protein Viewer:ENSP00000380538.4Re-query CCDS DB by Nucleotide ID:ENST00000397382Re-query CCDS DB by Protein ID:ENSP00000380538
Original member Current member NCBI NM_001130706.3 NP_001124178.1 Accepted alive Link to Nucleotide Sequence:NM_001130706.3Link to Protein Sequence:NP_001124178.1Re-query CCDS DB by Nucleotide ID:NM_001130706Re-query CCDS DB by Protein ID:NP_001124178Link to BLAST:NP_001124178.1
Original member Current member NCBI NM_001130708.3 NP_001124180.1 Accepted alive Link to Nucleotide Sequence:NM_001130708.3Link to Protein Sequence:NP_001124180.1Re-query CCDS DB by Nucleotide ID:NM_001130708Re-query CCDS DB by Protein ID:NP_001124180Link to BLAST:NP_001124180.1
Original member Current member NCBI NM_021944.4 NP_068763.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021944.4Link to Protein Sequence:NP_068763.2Re-query CCDS DB by Nucleotide ID:NM_021944Re-query CCDS DB by Protein ID:NP_068763Link to BLAST:NP_068763.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124178.1 538 Q9H972-1 538 100% 0 0
NP_001124180.1 538 Q9H972-1 538 100% 0 0
NP_068763.2 538 Q9H972-1 538 100% 0 0

Chromosomal Locations for CCDS 9583.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22987215 22987634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22987903 22988015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22989742 22989845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22990066 22990127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22995948 22996268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22998427 22999023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGTCCTTCAGTGCCACCATTCTCTTCTCCCCTCCCAGTGGCAGCGAGGCCAGATGCTGCTGCTGCGCCT
GTAAGAGTGAGACTAATGGAGGCAACACAGGCTCCCAGGGTGGGAATCCTCCTCCCAGCACCCCCATCAC
AGTGACTGGACATGGCTTGGCTGTTCAGAGCTCAGAGCAGCTCCTGCATGTTATCTACCAGCGGGTCGAT
AAGGCAGTGGGTTTGGCTGAAGCTGCTCTGGGTCTTGCCAGGGCCAACAATGAGTTGTTAAAACGTCTCC
AGGAGGAAGTGGGTGACCTGAGGCAAGGGAAAGTGTCCATCCCTGATGAAGATGGGGAAAGCCGGGCACA
TAGTTCCCCACCTGAGGAGCCTGGGCCTCTCAAGGAAAGTCCCGGGGAAGCCTTTAAGGCTCTGTCTGCC
GTGGAAGAGGAGTGTGACAGCGTGGGCAGCGGCGTGCAGGTGGTGATTGAGGAGCTGCGGCAGCTGGGAG
CAGCCTCAGTGGGGCCTGGGCCTTTGGGCTTCCCAGCAACTCAGAGGGACATGCGGCTCCCAGGGTGCAC
GCTGGCTGCCAGCGAGGCGGCCCCCCTGCTCAATCCTCTGGTGGATGATTACGTGGCCTCTGAGGGTGCA
GTACAGCGAGTTCTGGTCCCTGCTTATGCCAAGCAACTCTCACCAGCCACACAACTGGCAATCCAGCGGG
CAACCCCAGAGACAGGACCAGAAAATGGAACCAAGCTGCCACCACCCCGCCCTGAGGACATGCTCAATGC
CGCTGCTGCGCTGGACAGTGCCTTGGAAGAGTCAGGCCCTGGGAGCACTGGGGAGCTGAGACACTCTCTA
GGGCTGACCGTTTCCCCATGCAGGACCAGAGGAAGTGGGCAGAAGAACTCCAGGCGCAAGCGGGATCTTG
TACTCTCTAAACTGGTCCACAATGTGCATAACCACATCACCAATGACAAGAGATTCAATGGGTCTGAAAG
CATCAAGTCCTCTTGGAATATTTCAGTAGTGAAGTTTCTTCTGGAAAAGCTCAAGCAAGAGCTGGTGACC
AGTCCCCACAATTACACTGATAAGGAGCTAAAAGGAGCCTGTGTGGCCTACTTCCTTACTAAGAGGCGTG
AGTACCGCAACTCCCTGAACCCCTTTAAAGGCCTGAAGGAAAAAGAGGAGAAGAAACTTCGAAGTCGCCG
ATATCGGCTTTTTGCCAACCGATCCAGTATCATGAGGCATTTTGGACCTGAGGACCAACGTCTGTGGAAT
GATGTGACAGAGGAACTGATGTCAGATGAAGAGGACAGTCTTAACGAGCCAGGTGTGTGGGTGGCCCGCC
CTCCCCGTTTCCGGGCCCAGCGCCTCACAGAGCTCTGCTACCACCTGGATGCTAACTCTAAGCATGGCAC
CAAAGCCAACCGTGTGTATGGGCCTCCCTCAGACAGACTGCCTTCTGCTGAAGCCCAGCTCCTTCCACCA
GAACTTTACAATCCTAATTTCCAAGAAGAGGAAGATGAGGGAGGGGATGAGAATGCACCTGGCTCCCCAT
CTTTTGACCAACCCCACAAAACCTGCTGTCCTGACTTGAACTCATTCATTGAAATCAAGGTGGAAAAGGA
TGAATAA

Translation (538 aa):
MSFSATILFSPPSGSEARCCCCACKSETNGGNTGSQGGNPPPSTPITVTGHGLAVQSSEQLLHVIYQRVD
KAVGLAEAALGLARANNELLKRLQEEVGDLRQGKVSIPDEDGESRAHSSPPEEPGPLKESPGEAFKALSA
VEEECDSVGSGVQVVIEELRQLGAASVGPGPLGFPATQRDMRLPGCTLAASEAAPLLNPLVDDYVASEGA
VQRVLVPAYAKQLSPATQLAIQRATPETGPENGTKLPPPRPEDMLNAAAALDSALEESGPGSTGELRHSL
GLTVSPCRTRGSGQKNSRRKRDLVLSKLVHNVHNHITNDKRFNGSESIKSSWNISVVKFLLEKLKQELVT
SPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWN
DVTEELMSDEEDSLNEPGVWVARPPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDRLPSAEAQLLPP
ELYNPNFQEEEDEGGDENAPGSPSFDQPHKTCCPDLNSFIEIKVEKDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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