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Report for CCDS9623.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9623.1 Public Homo sapiens 14 DHRS1 24 110 108 CCDS HistoryNCBI Gene:115817Re-query CCDS DB by CCDS ID:9623.1Re-query CCDS DB by GeneID:115817See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9623.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288111.12 ENSP00000288111.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288111.12Link to Ensembl Protein Viewer:ENSP00000288111.7Re-query CCDS DB by Nucleotide ID:ENST00000288111Re-query CCDS DB by Protein ID:ENSP00000288111
Original member Current member EBI ENST00000396813.5 ENSP00000380027.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396813.5Link to Ensembl Protein Viewer:ENSP00000380027.1Re-query CCDS DB by Nucleotide ID:ENST00000396813Re-query CCDS DB by Protein ID:ENSP00000380027
Original member Current member NCBI NM_001136050.3 NP_001129522.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136050.3Link to Protein Sequence:NP_001129522.1Re-query CCDS DB by Nucleotide ID:NM_001136050Re-query CCDS DB by Protein ID:NP_001129522Link to BLAST:NP_001129522.1
Original member Current member NCBI NM_138452.3 NP_612461.1 Accepted alive Link to Nucleotide Sequence:NM_138452.3Link to Protein Sequence:NP_612461.1Re-query CCDS DB by Nucleotide ID:NM_138452Re-query CCDS DB by Protein ID:NP_612461Link to BLAST:NP_612461.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129522.1 313 Q96LJ7 313 100% 0 0
NP_612461.1 313 Q96LJ7 313 100% 0 0

Chromosomal Locations for CCDS 9623.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24290859 24290995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24291139 24291219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24291556 24291625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24292184 24292330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24292652 24292784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24296509 24296588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24296738 24296881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24298957 24299106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGCAGCTCCCATGAATGGCCAAGTGTGTGTGGTGACTGGTGCCTCCAGGGGTATTGGCCGTGGCATTG
CCTTGCAGCTCTGCAAAGCAGGCGCCACAGTTTACATCACTGGCCGCCATCTGGACACCCTTCGCGTTGT
TGCTCAGGAGGCACAATCCCTCGGGGGCCAATGTGTGCCTGTGGTGTGCGATTCAAGCCAGGAGAGTGAA
GTGCGAAGCCTGTTTGAGCAAGTGGATCGGGAACAGCAAGGGCGTCTAGATGTGCTGGTCAACAATGCTT
ATGCAGGGGTCCAGACGATCCTGAACACCAGGAATAAGGCATTCTGGGAAACCCCTGCCTCCATGTGGGA
TGATATCAACAACGTCGGACTCAGAGGCCACTACTTTTGCTCAGTGTATGGGGCACGGCTGATGGTACCA
GCTGGCCAGGGGCTCATCGTGGTCATCTCCTCCCCAGGAAGCCTGCAGTATATGTTCAATGTCCCCTATG
GTGTGGGCAAAGCTGCGTGTGACAAGCTGGCTGCTGACTGTGCCCACGAGCTGCGGCGCCATGGGGTCAG
CTGTGTGTCTCTGTGGCCGGGGATTGTGCAGACAGAACTGCTGAAGGAGCATATGGCAAAGGAGGAGGTC
CTGCAGGATCCTGTGTTGAAGCAGTTCAAATCAGCCTTCTCATCTGCGGAAACCACAGAATTGAGTGGCA
AATGTGTGGTGGCTTTGGCAACAGATCCCAATATCCTGAGCCTGAGTGGTAAGGTGCTGCCATCCTGTGA
CCTTGCTCGACGCTATGGCCTTCGGGATGTGGACGGCCGCCCCGTCCAAGACTATTTGTCTTTGAGCTCT
GTTCTCTCACACGTGTCCGGCCTGGGCTGGCTGGCCTCCTACCTGCCCTCCTTCCTCCGTGTGCCCAAGT
GGATTATTGCCCTCTACACTAGCAAGTTCTAA

Translation (313 aa):
MAAPMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESE
VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP
AGQGLIVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEV
LQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDLARRYGLRDVDGRPVQDYLSLSS
VLSHVSGLGWLASYLPSFLRVPKWIIALYTSKF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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