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Report for CCDS9726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9726.1 Public Homo sapiens 14 PELI2 24 110 108 CCDS HistoryNCBI Gene:57161Re-query CCDS DB by CCDS ID:9726.1Re-query CCDS DB by GeneID:57161See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267460.9 ENSP00000267460.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267460.9Link to Ensembl Protein Viewer:ENSP00000267460.4Re-query CCDS DB by Nucleotide ID:ENST00000267460Re-query CCDS DB by Protein ID:ENSP00000267460
Original member Current member NCBI NM_021255.3 NP_067078.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021255.3Link to Protein Sequence:NP_067078.1Re-query CCDS DB by Nucleotide ID:NM_021255Re-query CCDS DB by Protein ID:NP_067078Link to BLAST:NP_067078.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067078.1 420 Q9HAT8 420 100% 0 0

Chromosomal Locations for CCDS 9726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 56118661 56118737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56178335 56178464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56279676 56279777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56288437 56288634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56290268 56290456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 56296600 56297166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGTTTTCCCCTGGCCAGGAGGAACACTGCGCCCCCAATAAGGAGCCAGTGAAATACGGGGAGCTGGTGG
TGCTCGGGTACAATGGTGCTTTACCCAATGGAGATAGAGGACGGAGGAAAAGTAGATTTGCCCTCTACAA
GCGGCCCAAGGCAAATGGTGTCAAACCCAGCACCGTCCATGTGATATCCACGCCCCAGGCATCCAAGGCT
ATCAGCTGCAAAGGTCAACACAGTATATCCTACACTTTGTCAAGGAATCAGACTGTGGTGGTGGAGTACA
CACATGATAAGGATACGGATATGTTTCAGGTGGGCAGATCAACAGAAAGCCCTATCGACTTCGTTGTCAC
AGACACGATTTCTGGCAGCCAGAACACGGACGAAGCCCAGATCACACAGAGCACCATATCCAGGTTCGCC
TGCAGGATCGTGTGCGACAGGAATGAACCTTACACAGCACGGATATTCGCCGCCGGATTTGACTCTTCCA
AAAACATATTTCTTGGAGAAAAGGCAGCAAAGTGGAAAAACCCCGACGGCCACATGGATGGGCTCACTAC
TAATGGCGTCCTGGTGATGCATCCACGAGGGGGCTTCACCGAGGAGTCCCAGCCCGGGGTCTGGCGCGAG
ATCTCTGTCTGTGGAGATGTGTACACCTTGCGAGAAACCAGGTCGGCCCAGCAACGAGGAAAGCTGGTGG
AAAGTGAGACCAACGTCCTGCAGGACGGCTCCCTCATTGACCTGTGTGGGGCCACTCTCCTCTGGAGAAC
AGCAGATGGGCTTTTTCATACTCCAACTCAGAAGCACATAGAAGCCCTCCGGCAGGAGATTAACGCCGCC
CGGCCTCAGTGTCCTGTGGGGCTCAACACCCTGGCCTTCCCCAGCATCAACAGGAAAGAGGTGGTGGAGG
AGAAGCAGCCCTGGGCATATCTCAGTTGTGGCCACGTGCACGGGTACCACAACTGGGGCCATCGGAGTGA
CACGGAGGCCAACGAGAGGGAGTGTCCCATGTGCAGGACTGTGGGCCCCTATGTGCCTCTCTGGCTTGGC
TGTGAGGCAGGATTTTATGTAGACGCAGGACCGCCAACTCATGCTTTCACTCCCTGTGGACACGTGTGCT
CGGAGAAGTCTGCAAAATACTGGTCTCAGATCCCGTTGCCTCATGGAACTCATGCATTTCACGCTGCTTG
CCCTTTCTGTGCTACACAGCTGGTTGGGGAGCAAAACTGCATCAAATTAATTTTCCAAGGTCCAATTGAC
TGA

Translation (420 aa):
MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKA
ISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFA
CRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPRGGFTEESQPGVWRE
ISVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAA
RPQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLG
CEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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