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Report for CCDS975.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
975.2 Public Homo sapiens 1 ANXA9 24 110 108 CCDS HistoryNCBI Gene:8416Re-query CCDS DB by CCDS ID:975.2Re-query CCDS DB by GeneID:8416See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 975.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368947.9 ENSP00000357943.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368947.9Link to Ensembl Protein Viewer:ENSP00000357943.4Re-query CCDS DB by Nucleotide ID:ENST00000368947Re-query CCDS DB by Protein ID:ENSP00000357943
Original member Current member NCBI NM_003568.3 NP_003559.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003568.3Link to Protein Sequence:NP_003559.2Re-query CCDS DB by Nucleotide ID:NM_003568Re-query CCDS DB by Protein ID:NP_003559Link to BLAST:NP_003559.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003559.2 345 O76027 345 100% 0 0

Chromosomal Locations for CCDS 975.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150983106 150983180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150983338 150983434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150983975 150984069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150984281 150984394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150984586 150984676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150986336 150986415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150986602 150986661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150987872 150987956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150988091 150988186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150988283 150988341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150994577 150994699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150995260 150995322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGTCTGTGACTGGCGGGAAGATGGCACCGTCCCTCACCCAGGAGATCCTCAGCCACCTGGGCCTGGCCA
GCAAGACTGCAGCGTGGGGGACCCTGGGCACCCTCAGGACCTTCTTGAACTTCAGCGTGGACAAGGATGC
GCAGAGGCTACTGAGGGCCATTACTGGCCAAGGCGTGGACCGCAGTGCCATTGTGGACGTGCTGACCAAC
CGGAGCAGAGAGCAAAGGCAGCTCATCTCACGAAACTTCCAGGAGCGCACCCAACAGGACCTGATGAAGT
CTCTACAGGCAGCACTTTCCGGCAACCTGGAGAGGATTGTGATGGCTCTGCTGCAGCCCACAGCCCAGTT
TGACGCCCAGGAATTGAGGACAGCTCTGAAGGCCTCAGATTCTGCTGTGGACGTGGCCATTGAAATTCTT
GCCACTCGAACCCCACCCCAGCTGCAGGAGTGCCTGGCAGTCTACAAACACAATTTCCAGGTGGAGGCTG
TGGATGACATCACATCTGAGACCAGTGGCATCTTGCAGGACCTGCTGTTGGCCCTGGCCAAGGGGGGCCG
TGACAGCTACTCTGGAATCATTGACTATAATCTGGCAGAACAAGATGTCCAGGCACTGCAGCGGGCAGAA
GGACCTAGCAGAGAGGAAACATGGGTCCCAGTCTTCACCCAGCGAAATCCTGAACACCTCATCCGAGTGT
TTGATCAGTACCAGCGGAGCACTGGGCAAGAGCTGGAGGAGGCTGTCCAGAACCGTTTCCATGGAGATGC
TCAGGTGGCTCTGCTCGGCCTAGCTTCGGTGATCAAGAACACACCGCTGTACTTTGCTGACAAACTTCAT
CAAGCCCTCCAGGAAACTGAGCCCAATTACCAAGTCCTGATTCGCATCCTTATCTCTCGATGTGAGACTG
ACCTTCTGAGTATCAGAGCTGAGTTCAGGAAGAAATTTGGGAAGTCCCTCTACTCTTCTCTCCAGGATGC
AGTGAAAGGGGATTGCCAGTCAGCCCTCCTGGCCTTGTGCAGGGCTGAAGACATGTGA

Translation (345 aa):
MSVTGGKMAPSLTQEILSHLGLASKTAAWGTLGTLRTFLNFSVDKDAQRLLRAITGQGVDRSAIVDVLTN
RSREQRQLISRNFQERTQQDLMKSLQAALSGNLERIVMALLQPTAQFDAQELRTALKASDSAVDVAIEIL
ATRTPPQLQECLAVYKHNFQVEAVDDITSETSGILQDLLLALAKGGRDSYSGIIDYNLAEQDVQALQRAE
GPSREETWVPVFTQRNPEHLIRVFDQYQRSTGQELEEAVQNRFHGDAQVALLGLASVIKNTPLYFADKLH
QALQETEPNYQVLIRILISRCETDLLSIRAEFRKKFGKSLYSSLQDAVKGDCQSALLALCRAEDM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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