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Report for CCDS9811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9811.1 Public Homo sapiens 14 ZFYVE1 24 110 108 CCDS HistoryNCBI Gene:53349Re-query CCDS DB by CCDS ID:9811.1Re-query CCDS DB by GeneID:53349See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9811.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000556143.6 ENSP00000450742.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000556143.6Link to Ensembl Protein Viewer:ENSP00000450742.1Re-query CCDS DB by Nucleotide ID:ENST00000556143Re-query CCDS DB by Protein ID:ENSP00000450742
Original member Current member NCBI NM_021260.4 NP_067083.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021260.4Link to Protein Sequence:NP_067083.1Re-query CCDS DB by Nucleotide ID:NM_021260Re-query CCDS DB by Protein ID:NP_067083Link to BLAST:NP_067083.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067083.1 777 Q9HBF4-1 777 100% 0 0

Chromosomal Locations for CCDS 9811.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 72970882 72971114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72974080 72974193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72974779 72974959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72975551 72975721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72977927 72978044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72978137 72978234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72978861 72978969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72981789 72981895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72993143 72993357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72997811 72998315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73024026 73024508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2334 nt):
ATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCAGGAAAGTTACGCTT
GCAGCGGGACTGATGAAGCTATCTTTGAGTGTGATGAGTGCTGCAGTCTGCAGTGTCTCCGCTGCGAGGA
GGAGCTCCATCGGCAGGAGCGCCTGAGAAACCATGAGCGGATAAGACTCAAACCTGGCCATGTCCCTTAC
TGTGACCTCTGCAAGGGTCTCAGTGGGCATTTACCAGGTGTTAGGCAGAGGGCAATAGTGAGGTGCCAGA
CCTGCAAAATTAACTTGTGCCTGGAGTGCCAGAAGAGGACTCATTCTGGGGGTAACAAAAGGAGACACCC
TGTTACTGTGTACAATGTCAGTAATCTCCAGGAGTCACTGGAGGCAGAAGAGATGGATGAGGAGACCAAG
AGGAAGAAGATGACTGAGAAGGTTGTGAGTTTCCTCCTAGTAGACGAAAATGAAGAAATTCAGGTAACAA
ATGAAGAAGACTTTATTAGAAAATTGGACTGCAAACCTGATCAGCATCTGAAAGTGGTTTCCATTTTTGG
AAATACTGGTGATGGAAAGTCTCATACTCTCAACCACACTTTCTTTTATGGTCGTGAAGTCTTTAAAACC
TCCCCGACCCAGGAGTCCTGCACTGTGGGAGTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGA
TCGATACGGAAGGGCTCCTGGGGGCCACCGTGAATCTAAGCCAGAGAACACGGCTGCTGCTTAAGGTCCT
GGCCATCTCAGACCTCGTCATCTATCGAACTCATGCAGACCGGCTGCATAACGACCTCTTCAAATTCCTT
GGGGATGCCTCAGAAGCTTATCTGAAGCACTTCACCAAGGAGCTCAAGGCCACCACTGCTCGCTGTGGCC
TGGATGTCCCTTTATCCACACTGGGCCCTGCAGTTATCATCTTCCATGAGACCGTGCACACCCAGCTACT
GGGCTCTGATCATCCCTCAGAGGTGCCAGAGAAGCTCATCCAGGACCGGTTCCGGAAGCTGGGCCGTTTC
CCTGAAGCCTTTAGTTCCATTCACTACAAGGGAACGAGGACTTACAACCCTCCCACGGACTTTTCTGGGC
TTCGGCGTGCTTTGGAGCAGCTACTAGAGAATAACACCACCCGTTCTCCCCGGCACCCGGGAGTCATCTT
CAAAGCCCTGAAGGCACTAAGTGACCGCTTCAGCGGTGAGATCCCCGATGACCAGATGGCGCACAGCTCC
TTTTTTCCAGATGAGTATTTCACCTGCTCCTCCTTGTGCCTCAGCTGTGGGGTTGGATGTAAGAAAAGCA
TGAATCATGGGAAGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTCCCACCAGTATGACAA
CCGAGTGTATACCTGCAAGGCCTGCTATGAGAGAGGCGAGGAAGTCAGTGTAGTGCCCAAAACATCTGCT
TCCACTGACTCCCCCTGGATGGGTCTCGCAAAATATGCCTGGTCTGGGTATGTGATCGAATGTCCTAACT
GTGGCGTGGTCTATCGTAGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGATACGGTGGTGCGGAC
AGAGATTGTGCATGTGTGGCCTGGAACTGATGGGTTTCTGAAGGACAACAACAATGCTGCCCAGCGCCTG
TTGGACGGGATGAACTTCATGGCTCAGTCGGTGTCCGAGCTTAGCCTTGGACCCACCAAGGCTGTGACTT
CCTGGCTGACAGACCAGATCGCCCCTGCCTACTGGAGGCCCAACTCCCAGATTCTGAGCTGCAACAAGTG
TGCGACGTCCTTTAAAGATAACGACACTAAGCATCACTGCCGAGCCTGTGGGGAGGGCTTCTGTGACAGC
TGTTCATCAAAGACTCGGCCAGTGCCTGAGCGGGGCTGGGGCCCTGCGCCAGTGCGGGTCTGTGACAACT
GCTACGAAGCCAGGAACGTCCAGTTAGCTGTTACCGAGGCACAAGTGGACGATGAAGGTGGAACGCTCAT
TGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTCTGGGAGCCGTGGTGACAGCCATTGACATACCACTA
GGTCTGGTAAAGGACGCGGCCAGGCCTGCGTACTGGGTGCCTGACCACGAAATCCTCCACTGCCACAACT
GCCGGAAGGAGTTCAGCATCAAGCTCTCCAAGCACCACTGCCGGGCCTGCGGACAGGGCTTCTGTGATGA
GTGCTCCCATGACCGCCGGGCTGTTCCTTCTCGTGGCTGGGACCATCCCGTCCGAGTCTGCTTCAACTGC
AATAAAAAGCCCGGTGACCTTTAA

Translation (777 aa):
MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHERIRLKPGHVPY
CDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTVYNVSNLQESLEAEEMDEETK
RKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHLKVVSIFGNTGDGKSHTLNHTFFYGREVFKT
SPTQESCTVGVWAAYDPVHKVAVIDTEGLLGATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFL
GDASEAYLKHFTKELKATTARCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRF
PEAFSSIHYKGTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSA
STDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRL
LDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDS
CSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPL
GLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNC
NKKPGDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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