NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
997.1 Public Homo sapiens 1 POGZ 24 110 108 CCDS HistoryNCBI Gene:23126Re-query CCDS DB by CCDS ID:997.1Re-query CCDS DB by GeneID:23126See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 997.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271715.7 ENSP00000271715.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000271715.7Link to Ensembl Protein Viewer:ENSP00000271715.2Re-query CCDS DB by Nucleotide ID:ENST00000271715Re-query CCDS DB by Protein ID:ENSP00000271715
Original member Current member EBI ENST00000439756.2 ENSP00000390156.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439756.2Link to Ensembl Protein Viewer:ENSP00000390156.2Re-query CCDS DB by Nucleotide ID:ENST00000439756Re-query CCDS DB by Protein ID:ENSP00000390156
Original member Current member NCBI NM_015100.4 NP_055915.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015100.4Link to Protein Sequence:NP_055915.2Re-query CCDS DB by Nucleotide ID:NM_015100Re-query CCDS DB by Protein ID:NP_055915Link to BLAST:NP_055915.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055915.2 1410 Q7Z3K3-1 1410 100% 0 0

Chromosomal Locations for CCDS 997.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151404802 151406464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151406607 151406631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151406911 151407023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151407235 151407291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408100 151408240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408409 151408581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408694 151408828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151411625 151411771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151412296 151412396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151423397 151423551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151423949 151424286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151424955 151425061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151427823 151428041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151428123 151428413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151429603 151429711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151430666 151430841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151440928 151441086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151442081 151442204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4233 nt):
ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATG
TCATTGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGTTTCTGTGAGCCAGCA
GCCAGTCTCGGCTCCAGTGCCCATCGCTGCCCATGCTTCTGTTGCTGGGCACCTCTCTACATCCACCACC
GTTAGTAGCAGCGGGGCACAGAACAGCGACAGTACAAAGAAGACTCTTGTCACACTAATTGCCAACAACA
ATGCTGGCAATCCTTTGGTCCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCT
GGGCACAATGGTTACTCAACCAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGT
TCCCCTGTGGCCTCACAACCAATATTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTAC
AAAATGCAATGAATCAGGTTGGGATTGTGCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACT
AGTTCCAGCCCCAGGTACCCAGTTTGTTAAGCCGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACC
CCTGTGAGGCCAGGCTCCACAATGCCTGTGAGGCCCACCACCAACACCTTCACCACCGTCATCCCGGCCA
CTCTTACCATTCGAAGCACCGTCCCACAGTCCCAGTCCCAGCAGACCAAGTCCACTCCCAGCACTTCTAC
CACTCCCACTGCCACACAGCCAACCTCACTGGGGCAACTAGCTGTTCAGTCTCCAGGCCAGTCAAACCAG
ACCACGAATCCCAAGCTAGCTCCCTCCTTCCCCTCTCCACCTGCAGTGAGCATTGCCAGCTTTGTCACTG
TGAAGCGACCTGGTGTTACAGGCGAAAATAGCAATGAAGTGGCCAAATTGGTGAATACCCTTAACACCAT
CCCTTCCCTGGGCCAGAGTCCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTCATGGCTCTCAAAGA
ACCAGCGGACCTGAGTCTTCAATGAAAGTGACCTCTTCCATCCCAGTATTTGACCTCCAGGATGGTGGAC
GGAAAATATGTCCACGATGTAATGCTCAATTTCGTGTTACTGAAGCTTTGAGAGGTCACATGTGTTACTG
TTGCCCAGAAATGGTTGAATACCAGAAGAAAGGAAAGTCCCTGGATTCAGAACCCAGTGTCCCATCAGCA
GCAAAGCCCCCATCCCCTGAGAAAACAGCTCCTGTTGCTTCCACACCCTCTTCTACACCTATTCCTGCTC
TGTCACCGCCTACCAAAGTACCAGAACCAAATGAGAACGTGGGCGATGCCGTCCAGACCAAACTCATTAT
GCTTGTAGATGACTTCTACTATGGACGGGATGGTGGCAAAGTAGCCCAGCTCACAAATTTCCCTAAGGTC
GCCACATCTTTCCGATGCCCACATTGTACCAAAAGGCTAAAAAACAATATTCGATTCATGAACCATATGA
AACACCACGTAGAACTCGATCAGCAGAACGGTGAGGTAGATGGTCACACTATCTGCCAGCACTGTTACCG
CCAGTTTTCCACTCCCTTCCAGCTTCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACC
AAGTGCAAGATCTGTGAATGGGCGTTTGAAAGTGAGCCACTATTTCTCCAGCATATGAAGGATACTCATA
AGCCTGGAGAGATGCCTTATGTTTGCCAGGTGTGTCAATATCGCTCCTCACTCTACTCTGAGGTAGATGT
CCATTTTCGGATGATCCATGAGGATACCCGGCATCTGCTCTGCCCTTATTGCCTGAAGGTCTTCAAAAAT
GGCAATGCATTCCAACAGCATTACATGAGGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGC
TGCAGTTTCTCTTTGCCAAGGACAAAATTGAACACAAGCTTCAACACCATAAAACCTTCCGTAAACCCAA
GCAGCTGGAGGGCTTGAAACCAGGCACCAAGGTGACAATCCGGGCTTCCCGAGGGCAGCCACGAACTGTT
CCTGTATCCTCTAATGATACACCTCCCAGCGCCTTGCAGGAGGCAGCACCGCTGACCTCCTCAATGGACC
CTCTGCCTGTCTTCCTTTATCCCCCTGTCCAGCGCAGCATCCAGAAGAGAGCTGTTAGGAAAATGAGTGT
CATGGGCCGGCAGACATGCCTGGAGTGCAGCTTCGAGATCCCAGACTTCCCTAATCATTTCCCTACTTAC
GTACACTGCTCTCTGTGTCGCTATAGCACCTGCTGTTCTCGAGCTTATGCCAACCACATGATCAACAATC
ATGTTCCACGGAAGAGCCCCAAGTATTTGGCTTTGTTTAAAAATTCTGTGAGTGGAATCAAGCTGGCCTG
CACTTCATGTACCTTTGTTACCTCTGTGGGCGATGCTATGGCCAAGCATTTGGTATTCAACCCCTCTCAC
AGATCCAGCAGCATCCTGCCACGGGGACTCACTTGGATAGCTCACTCAAGGCATGGCCAGACTCGTGACC
GAGTGCATGACCGGAACGTGAAGAATATGTACCCTCCTCCTTCCTTCCCCACTAACAAAGCTGCCACTGT
GAAATCTGCGGGGGCCACCCCAGCTGAGCCTGAAGAGCTACTAACTCCCTTAGCCCCAGCACTCCCATCA
CCAGCCTCAACTGCAACCCCACCACCAACCCCCACTCACCCGCAGGCTTTAGCCCTTCCACCGCTGGCTA
CAGAGGGAGCCGAATGTCTGAATGTTGATGATCAGGATGAAGGGAGCCCAGTCACCCAAGAACCTGAGCT
AGCATCAGGTGGTGGTGGTAGTGGTGGAGTTGGCAAAAAGGAGCAGCTGTCTGTGAAGAAGCTTCGAGTA
GTACTGTTTGCTCTATGCTGCAATACAGAACAGGCAGCTGAACACTTCCGAAATCCCCAGCGACGTATTC
GCCGTTGGCTTCGACGTTTCCAGGCCTCCCAGGGGGAGAATCTAGAGGGCAAATATCTGAGCTTTGAGGC
AGAAGAGAAACTGGCTGAGTGGGTGCTAACCCAGCGCGAACAACAGCTACCTGTAAATGAGGAGACCTTG
TTCCAGAAGGCCACCAAAATAGGACGTTCTTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGC
GTTTCATGCTGCGGCACCACCTGACTCCCCATGCCCGGCGAGCTGTGGCCCACACCCTACCTAAGGATGT
AGCAGAGAATGCAGGACTCTTCATTGATTTTGTACAACGGCAGATTCACAACCAGGACTTACCCTTGTCT
ATGATTGTGGCTATTGATGAGATCTCTTTGTTCCTGGATACAGAGGTGCTGAGCAGTGATGATCGAAAGG
AGAATGCCCTGCAGACAGTGGGCACAGGGGAACCTTGGTGTGATGTAGTCCTAGCCATTCTGGCAGATGG
CACTGTCCTTCCCACCCTGGTTTTCTACAGAGGGCAGATGGATCAGCCTGCTAACATGCCAGACTCCATA
TTGCTAGAGGCAAAGGAGAGTGGCTACAGTGATGACGAGATCATGGAGCTGTGGTCAACTCGAGTGTGGC
AGAAGCACACAGCTTGCCAGCGCAGCAAAGGCATGCTTGTGATGGACTGTCATCGCACTCACTTGTCAGA
AGAGGTACTGGCTATGCTTAGTGCCTCTAGCACTTTGCCTGCAGTGGTCCCAGCAGGCTGTAGCTCCAAA
ATTCAGCCATTAGATGTATGCATCAAAAGAACTGTCAAGAACTTCCTGCATAAAAAATGGAAGGAACAGG
CTCGGGAAATGGCAGATACTGCATGTGATTCTGATGTCCTGCTTCAGCTGGTGCTTGTCTGGCTGGGTGA
AGTGCTAGGTGTCATTGGGGACTGTCCAGAGCTAGTTCAGCGCTCCTTCCTGGTGGCTAGTGTTCTGCCT
GGCCCCGATGGCAACATTAACTCACCTACAAGAAATGCTGACATGCAGGAGGAGCTAATTGCCTCCCTAG
AGGAGCAACTGAAGCTGAGTGGGGAACATTCTGAGTCTTCCACTCCACGACCCAGATCATCTCCTGAAGA
GACAATTGAGCCTGAAAGTCTTCACCAGCTCTTTGAGGGTGAAAGTGAGACCGAGTCTTTCTATGGCTTT
GAAGAAGCTGACCTAGATCTGATGGAGATTTGA

Translation (1410 aa):
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTTVSVSQQPVSAPVPIAAHASVAGHLSTSTT
VSSSGAQNSDSTKKTLVTLIANNNAGNPLVQQGGQPLILTQNPAPGLGTMVTQPVLRPVQVMQNANHVTS
SPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMT
PVRPGSTMPVRPTTNTFTTVIPATLTIRSTVPQSQSQQTKSTPSTSTTPTATQPTSLGQLAVQSPGQSNQ
TTNPKLAPSFPSPPAVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPVVVSNNSSAHGSQR
TSGPESSMKVTSSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDSEPSVPSA
AKPPSPEKTAPVASTPSSTPIPALSPPTKVPEPNENVGDAVQTKLIMLVDDFYYGRDGGKVAQLTNFPKV
ATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPFQLQCHLENVHSPYESTT
KCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKN
GNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTV
PVSSNDTPPSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTY
VHCSLCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFVTSVGDAMAKHLVFNPSH
RSSSILPRGLTWIAHSRHGQTRDRVHDRNVKNMYPPPSFPTNKAATVKSAGATPAEPEELLTPLAPALPS
PASTATPPPTPTHPQALALPPLATEGAECLNVDDQDEGSPVTQEPELASGGGGSGGVGKKEQLSVKKLRV
VLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLSFEAEEKLAEWVLTQREQQLPVNEETL
FQKATKIGRSLEGGFKISYEWAVRFMLRHHLTPHARRAVAHTLPKDVAENAGLFIDFVQRQIHNQDLPLS
MIVAIDEISLFLDTEVLSSDDRKENALQTVGTGEPWCDVVLAILADGTVLPTLVFYRGQMDQPANMPDSI
LLEAKESGYSDDEIMELWSTRVWQKHTACQRSKGMLVMDCHRTHLSEEVLAMLSASSTLPAVVPAGCSSK
IQPLDVCIKRTVKNFLHKKWKEQAREMADTACDSDVLLQLVLVWLGEVLGVIGDCPELVQRSFLVASVLP
GPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPESLHQLFEGESETESFYGF
EEADLDLMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH