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Report for CCDS9986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9986.1 Public Homo sapiens 14 ATP5MJ 24 110 108 CCDS HistoryNCBI Gene:9556Re-query CCDS DB by CCDS ID:9986.1Re-query CCDS DB by GeneID:9556See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9986.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286953.8 ENSP00000286953.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286953.8Link to Ensembl Protein Viewer:ENSP00000286953.4Re-query CCDS DB by Nucleotide ID:ENST00000286953Re-query CCDS DB by Protein ID:ENSP00000286953
Original member Current member EBI ENST00000557040.5 ENSP00000450894.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557040.5Link to Ensembl Protein Viewer:ENSP00000450894.1Re-query CCDS DB by Nucleotide ID:ENST00000557040Re-query CCDS DB by Protein ID:ENSP00000450894
Original member Current member EBI ENST00000554880.5 ENSP00000452133.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554880.5Link to Ensembl Protein Viewer:ENSP00000452133.1Re-query CCDS DB by Nucleotide ID:ENST00000554880Re-query CCDS DB by Protein ID:ENSP00000452133
Original member Current member NCBI NM_004894.3 NP_004885.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004894.3Link to Protein Sequence:NP_004885.1Re-query CCDS DB by Nucleotide ID:NM_004894Re-query CCDS DB by Protein ID:NP_004885Link to BLAST:NP_004885.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004885.1 58 P56378-1 58 100% 0 0

Chromosomal Locations for CCDS 9986.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 103912666 103912694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103913961 103913984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 103915066 103915189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (177 nt):
ATGCTTCAAAGTATTATTAAAAACATATGGATCCCCATGAAGCCCTACTACACCAAAGTTTACCAGGAGA
TTTGGATAGGAATGGGGCTGATGGGCTTCATCGTTTATAAAATCCGGGCTGCTGATAAAAGAAGTAAGGC
TTTGAAAGCTTCAGCGCCTGCTCCTGGTCATCACTAA

Translation (58 aa):
MLQSIIKNIWIPMKPYYTKVYQEIWIGMGLMGFIVYKIRAADKRSKALKASAPAPGHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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